RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 HSD52Q0P140 79 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 ZFAND6Q6FIF0 208 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 DEFB113Q30KQ7 82 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 SIGMAR1Q99720 223 aa11.33□□□□□ -0.6
TRIM13-202ENST00000378182 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 PLXNA4Q9HCM2 1894 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 SLURP1P55000 103 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 WDR83OSQ9Y284 106 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 J3QLI3 93 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 IGLV10-54A0A075B6I4 117 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 CRLF1O75462 422 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 CDKN1BP46527 198 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 ZNF503Q96F45 646 aa11.32□□□□□ -0.6
TRIM13-202ENST00000378182 C9orf66Q5T8R8 295 aa11.31□□□□□ -0.6
TRIM13-202ENST00000378182 NDUFS7O75251 213 aa11.31□□□□□ -0.6
TRIM13-202ENST00000378182 C4orf48Q5BLP8 95 aa11.31□□□□□ -0.6
TRIM13-202ENST00000378182 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
TRIM13-202ENST00000378182 NLRC5Q86WI3 1866 aa11.31□□□□□ -0.6
TRIM13-202ENST00000378182 GRNP28799 593 aaKnown RBP11.31□□□□□ -0.6
TRIM13-202ENST00000378182 DEFB4AO15263 64 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 RNASE2P10153 161 aaKnown RBP11.3□□□□□ -0.6
TRIM13-202ENST00000378182 ATRAIDQ6UW56 229 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 PIFOQ8TCI5 191 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 ABCA1O95477 2261 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 MORN5Q5VZ52 161 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 B3GALT5-AS1P59052 145 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 GAGE2BQ13066 116 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 USF3Q68DE3 2245 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 TIRAPP58753 221 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
TRIM13-202ENST00000378182 SMPXQ9UHP9 88 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 TINCRA0A1B0GVN0 87 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 PRSS33Q8NF86 280 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 LAIR2Q6ISS4 152 aa11.3□□□□□ -0.6
TRIM13-202ENST00000378182 CCL18P55774 89 aa11.29□□□□□ -0.6
TRIM13-202ENST00000378182 WISP1O95388 367 aa11.29□□□□□ -0.6
TRIM13-202ENST00000378182 SOCS3O14543 225 aa11.29□□□□□ -0.6
TRIM13-202ENST00000378182 CRYGCP07315 174 aa11.29□□□□□ -0.6
TRIM13-202ENST00000378182 EP300Q09472 2414 aaPredicted RBP11.29□□□□□ -0.6
TRIM13-202ENST00000378182 LYPD3O95274 346 aa11.29□□□□□ -0.6
TRIM13-202ENST00000378182 GP9P14770 177 aa11.29□□□□□ -0.6
TRIM13-202ENST00000378182 STPG4Q8N801 248 aa11.29□□□□□ -0.6
TRIM13-202ENST00000378182 LRCOL1A6NCL2 159 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 H0YIZ8 118 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 GFI1Q99684 422 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 SHANK2-AS3Q9BTD1 123 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 HOXB4P17483 251 aaPredicted RBP11.28□□□□□ -0.6
TRIM13-202ENST00000378182 ID3Q02535 119 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 TPSG1Q9NRR2 321 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 CXCL1P09341 107 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 U3KQE9 123 aa11.28□□□□□ -0.6
TRIM13-202ENST00000378182 CARHSP1Q9Y2V2 147 aaKnown RBP11.28□□□□□ -0.6
TRIM13-202ENST00000378182 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.6
TRIM13-202ENST00000378182 RS1O15537 224 aa11.27□□□□□ -0.6
TRIM13-202ENST00000378182 IFITM2Q01629 132 aa11.27□□□□□ -0.6
TRIM13-202ENST00000378182 C1orf43Q9BWL3 253 aa11.27□□□□□ -0.61
TRIM13-202ENST00000378182 Q86TA4 180 aa11.27□□□□□ -0.61
TRIM13-202ENST00000378182 PRSS57Q6UWY2 283 aa11.27□□□□□ -0.61
TRIM13-202ENST00000378182 ZFP36P26651 326 aaKnown RBP11.27□□□□□ -0.61
TRIM13-202ENST00000378182 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
TRIM13-202ENST00000378182 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
TRIM13-202ENST00000378182 IGLL5B9A064 214 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 RHODO00212 210 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 C15orf62A8K5M9 175 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 ANAPC1Q9H1A4 1944 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 CHKB-CPT1BH3BT56 60 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 IGHG4P01861 327 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 ZC2HC1BQ5TFG8 222 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 F6UB75 175 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 SPRY2O43597 315 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
TRIM13-202ENST00000378182 C9orf153Q5TBE3 101 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 LYPD1Q8N2G4 141 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 ZNF134P52741 427 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 ARTNQ5T4W7 220 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 NDUFA4O00483 81 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BKO60814 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BJP06899 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BOP23527 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BBP33778 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 UBE2AP49459 152 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BDP58876 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BCP62807 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST2H2BEQ16778 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BHQ93079 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BNQ99877 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 HIST1H2BMQ99879 126 aa11.25□□□□□ -0.61
TRIM13-202ENST00000378182 LY6G6FQ5SQ64 297 aa11.24□□□□□ -0.61
TRIM13-202ENST00000378182 CNOT1A5YKK6 2376 aaKnown RBP11.24□□□□□ -0.61
TRIM13-202ENST00000378182 PFN1P07737 140 aaKnown RBP11.24□□□□□ -0.61
TRIM13-202ENST00000378182 IGHV4-38-2P0DP08 117 aa11.24□□□□□ -0.61
TRIM13-202ENST00000378182 IGHV4-30-2A0A087WSY4 118 aa11.24□□□□□ -0.61
TRIM13-202ENST00000378182 GYPEP15421 78 aa11.24□□□□□ -0.61
TRIM13-202ENST00000378182 KIR3DS1Q14943 382 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms