RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 ITLN2Q8WWU7 325 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 EEF1AKMT3Q96AZ1 226 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 MRPL53Q96EL3 112 aaKnown RBP9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 TP73-AS1Q9UF72 201 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 TRAV8-2A0A0B4J237 113 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 PPBPP02775 128 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 COX8AP10176 69 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 SFTPCP11686 197 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 CRIP2P52943 208 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 ERCC8Q13216 396 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 LGALS9BQ3B8N2 356 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 MPV17L2Q567V2 206 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 LGALS9CQ6DKI2 356 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 CLEC19AQ6UXS0 136 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 ZNF738Q8NE65 137 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 PPP1R14DQ9NXH3 145 aa9.05□□□□□ -0.96
TNFRSF9-201ENST00000377507 MUC21A0A0G2JKD1 596 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 MUC21A0A140T8X8 626 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 NPYP01303 97 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 ORM1P02763 201 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 CKS2P33552 79 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 MUC21Q5SSG8 566 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 BVES-AS1Q5T3Y7 98 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 C12orf54Q6X4T0 127 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 PMCHL2Q9BQD1 86 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 HIF1ANQ9NWT6 349 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 IGF2RP11717 2491 aa9.04□□□□□ -0.96
TNFRSF9-201ENST00000377507 HBDP02042 147 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 HIST1H1AQ02539 215 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 RNF182Q8N6D2 247 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 MSRB1Q9NZV6 116 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 CSMD1Q96PZ7 3565 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 IGKV3D-20A0A0C4DH25 116 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 H0Y8G0 127 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 TCF21O43680 179 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 NUDT3O95989 172 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 UBE2V1Q13404 147 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 LY6DQ14210 128 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 IL17RELQ6ZVW7 336 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 METTL26Q96S19 204 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 PRORYQ9H606 182 aa9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 TIMM8BQ9Y5J9 83 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF9-201ENST00000377507 C19orf84I3L1E1 186 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 CCL25O15444 150 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 ATP5G2Q06055 141 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 PRSS57Q6UWY2 283 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 C9orf47Q6ZRZ4 202 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 Q6ZVH6 145 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 DEFB125Q8N687 156 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 OR1N2Q8NGR9 330 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 PIFOQ8TCI5 191 aa9.02□□□□□ -0.97
TNFRSF9-201ENST00000377507 FAM223BA6NKX1 122 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 SMKR1H3BMG3 65 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 FGF6P10767 208 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 C8orf86Q6ZUL3 223 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 C2orf91Q6ZV80 131 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 FAM223AQ8IWN6 122 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 OR8A1Q8NGG7 326 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 MOB4Q9Y3A3 225 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 NBASA2RRP1 2371 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 ATRXP46100 2492 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 TRAV41A0A0B4J266 112 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV3-66A0A0C4DH42 116 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 BRI3O95415 125 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV4-39P01824 125 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 MEGF9Q9H1U4 602 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 C11orf21Q9P2W6 132 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 WNK2Q9Y3S1 2297 aa9.01□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
TNFRSF9-201ENST00000377507 TAX1BP3O14907 124 aa9□□□□□ -0.97
TNFRSF9-201ENST00000377507 IFI27L1Q96BM0 104 aa9□□□□□ -0.97
TNFRSF9-201ENST00000377507 MAP1LC3AQ9H492 121 aa9□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV1-69DA0A0B4J2H0 117 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 PRSS47A8MTI9 375 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV1-69P01742 117 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 PTTG1IPP53801 180 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 ANKRD39Q53RE8 183 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 TMEM78Q5T7P6 136 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 GLMPQ8WWB7 406 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 NXT2Q9NPJ8 142 aaKnown RBP8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 HIVEP3Q5T1R4 2406 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV3OR16-13A0A075B7E8 117 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV3-74A0A0B4J1X5 117 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGHV7-4-1A0A0J9YVY3 117 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 CD5LO43866 347 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 IGF1P05019 195 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 CACNG7P62955 275 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 TMEM219Q86XT9 240 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 BOD1L2Q8IYS8 172 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 LENEPQ9Y5L5 61 aa8.99□□□□□ -0.97
TNFRSF9-201ENST00000377507 FCER1GP30273 86 aa8.98□□□□□ -0.97
TNFRSF9-201ENST00000377507 UQCRFS1P47985 274 aa8.98□□□□□ -0.97
TNFRSF9-201ENST00000377507 FXYD7P58549 80 aa8.98□□□□□ -0.97
TNFRSF9-201ENST00000377507 FOXE3Q13461 319 aa8.98□□□□□ -0.97
TNFRSF9-201ENST00000377507 MED13LQ71F56 2210 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms