RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 ZNF493Q6ZR52 646 aa13.42□□□□□ -0.26
CBWD3-204ENST00000377349 RNASE8Q8TDE3 154 aaKnown RBP13.42□□□□□ -0.26
CBWD3-204ENST00000377349 PPP1R1CQ8WVI7 109 aa13.42□□□□□ -0.26
CBWD3-204ENST00000377349 SMIM3Q9BZL3 60 aa13.42□□□□□ -0.26
CBWD3-204ENST00000377349 TMEM14CQ9P0S9 112 aa13.42□□□□□ -0.26
CBWD3-204ENST00000377349 GAGE12BA1L429 117 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 GAGE7O76087 117 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 OR10J4P0C629 311 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 GAGE12FP0CL80 117 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 GAGE12GP0CL81 117 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 GAGE12IP0CL82 117 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 H2BFSP57053 126 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 OR5I1Q13606 314 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 ICAM4Q14773 271 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 ZNRF2Q8NHG8 242 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 C20orf144Q9BQM9 153 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 KCNIP2Q9NS61 270 aa13.41□□□□□ -0.26
CBWD3-204ENST00000377349 IGKV2-40A0A087WW87 121 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-204ENST00000377349 CBY3A6NI87 242 aa13.4□□□□□ -0.26
CBWD3-204ENST00000377349 C17orf112F2Z3M2 114 aa13.4□□□□□ -0.26
CBWD3-204ENST00000377349 ZNF253O75346 499 aa13.4□□□□□ -0.26
CBWD3-204ENST00000377349 NDUFB4O95168 129 aa13.4□□□□□ -0.26
CBWD3-204ENST00000377349 IGKV2D-40P01614 121 aaPredicted RBP13.4□□□□□ -0.26
CBWD3-204ENST00000377349 CHAC2Q8WUX2 184 aa13.4□□□□□ -0.26
CBWD3-204ENST00000377349 WDR61Q9GZS3 305 aaKnown RBP13.4□□□□□ -0.26
CBWD3-204ENST00000377349 OR7C2O60412 319 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 PET100P0DJ07 73 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 RNASE4P34096 147 aaKnown RBP13.39□□□□□ -0.27
CBWD3-204ENST00000377349 ATP5SQ99766 215 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 NBDYA0A0U1RRE5 68 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 C7orf71A4D174 169 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 BTN1A1Q13410 526 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 PDE6HQ13956 83 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 MRPL53Q96EL3 112 aaKnown RBP13.39□□□□□ -0.27
CBWD3-204ENST00000377349 ODF3Q96PU9 254 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 MARVELD1Q9BSK0 173 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 PAXXQ9BUH6 204 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 OR51M1Q9H341 326 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 PRELID1Q9Y255 219 aa13.39□□□□□ -0.27
CBWD3-204ENST00000377349 A0A0J9YY99 117 aa13.38□□□□□ -0.27
CBWD3-204ENST00000377349 FFAR4Q5NUL3 377 aa13.38□□□□□ -0.27
CBWD3-204ENST00000377349 TMEM78Q5T7P6 136 aa13.38□□□□□ -0.27
CBWD3-204ENST00000377349 SCGB1C1Q8TD33 95 aa13.38□□□□□ -0.27
CBWD3-204ENST00000377349 MPC2O95563 127 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 IFNA5P01569 189 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 SLC25A5P05141 298 aaKnown RBP13.37□□□□□ -0.27
CBWD3-204ENST00000377349 GPX1P07203 203 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 NBEAP1P0C6P0 100 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 CD300CQ08708 224 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 RNF141Q8WVD5 230 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 FAM167A-AS1Q96KT0 104 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 PYGO2Q9BRQ0 406 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 MRPL32Q9BYC8 188 aaKnown RBP13.37□□□□□ -0.27
CBWD3-204ENST00000377349 AGPAT4-IT1Q9H0P7 198 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 MBD2Q9UBB5 411 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 FUT9Q9Y231 359 aa13.37□□□□□ -0.27
CBWD3-204ENST00000377349 RPL12P30050 165 aaKnown RBP13.36□□□□□ -0.27
CBWD3-204ENST00000377349 UBE2L3P68036 154 aaKnown RBP13.36□□□□□ -0.27
CBWD3-204ENST00000377349 PHYHIPLQ96FC7 376 aa13.36□□□□□ -0.27
CBWD3-204ENST00000377349 VGLL1Q99990 258 aa13.36□□□□□ -0.27
CBWD3-204ENST00000377349 LINC00588Q9Y4M8 146 aa13.36□□□□□ -0.27
CBWD3-204ENST00000377349 HSPB11Q9Y547 144 aa13.36□□□□□ -0.27
CBWD3-204ENST00000377349 TRAV26-1A0A087WT03 109 aa13.35□□□□□ -0.27
CBWD3-204ENST00000377349 C16orf90A8MZG2 172 aa13.35□□□□□ -0.27
CBWD3-204ENST00000377349 EIF3GO75821 320 aaKnown RBP eCLIP13.35□□□□□ -0.27
CBWD3-204ENST00000377349 CDK2AP2O75956 126 aa13.35□□□□□ -0.27
CBWD3-204ENST00000377349 CCL18P55774 89 aa13.35□□□□□ -0.27
CBWD3-204ENST00000377349 C6orf223Q8N319 242 aa13.35□□□□□ -0.27
CBWD3-204ENST00000377349 Q8TAT8 98 aa13.35□□□□□ -0.27
CBWD3-204ENST00000377349 GNPNAT1Q96EK6 184 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-204ENST00000377349 LINC00477Q96M19 166 aa13.35□□□□□ -0.27
CBWD3-204ENST00000377349 RANP62826 216 aaKnown RBP13.34□□□□□ -0.27
CBWD3-204ENST00000377349 Q6ZTI0 123 aa13.34□□□□□ -0.27
CBWD3-204ENST00000377349 FXYD5Q96DB9 178 aa13.34□□□□□ -0.27
CBWD3-204ENST00000377349 TMPRSS5Q9H3S3 457 aa13.34□□□□□ -0.27
CBWD3-204ENST00000377349 GSN-AS1Q9NRJ2 163 aa13.34□□□□□ -0.27
CBWD3-204ENST00000377349 TRGV2A0A075B6R0 118 aa13.33□□□□□ -0.28
CBWD3-204ENST00000377349 RGS13O14921 159 aa13.33□□□□□ -0.28
CBWD3-204ENST00000377349 CSN1S1P47710 185 aa13.33□□□□□ -0.28
CBWD3-204ENST00000377349 RPH3ALQ9UNE2 315 aa13.33□□□□□ -0.28
CBWD3-204ENST00000377349 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
CBWD3-204ENST00000377349 M6PRP20645 277 aa13.32□□□□□ -0.28
CBWD3-204ENST00000377349 ZNF680Q8NEM1 530 aa13.32□□□□□ -0.28
CBWD3-204ENST00000377349 HYLS1Q96M11 299 aa13.32□□□□□ -0.28
CBWD3-204ENST00000377349 KLLNB2CW77 178 aa13.31□□□□□ -0.28
CBWD3-204ENST00000377349 HOXA5P20719 270 aa13.31□□□□□ -0.28
CBWD3-204ENST00000377349 KHDC3LQ587J8 217 aa13.31□□□□□ -0.28
CBWD3-204ENST00000377349 PRR9Q5T870 116 aa13.31□□□□□ -0.28
CBWD3-204ENST00000377349 C9orf47Q6ZRZ4 202 aa13.31□□□□□ -0.28
CBWD3-204ENST00000377349 EIF4E3Q8N5X7 224 aaKnown RBP13.31□□□□□ -0.28
CBWD3-204ENST00000377349 KRTAP1-5Q9BYS1 174 aa13.31□□□□□ -0.28
CBWD3-204ENST00000377349 Q9H3A6 140 aa13.31□□□□□ -0.28
CBWD3-204ENST00000377349 ALG5Q9Y673 324 aa13.31□□□□□ -0.28
CBWD3-204ENST00000377349 SSX7Q7RTT5 188 aa13.3□□□□□ -0.28
CBWD3-204ENST00000377349 ARPC5LQ9BPX5 153 aa13.3□□□□□ -0.28
CBWD3-204ENST00000377349 HERC1Q15751 4861 aa13.3□□□□□ -0.28
CBWD3-204ENST00000377349 ZNF138P52744 262 aa13.3□□□□□ -0.28
CBWD3-204ENST00000377349 TAS2R45P59539 299 aa13.3□□□□□ -0.28
CBWD3-204ENST00000377349 Q6ZQT7 251 aa13.3□□□□□ -0.28
CBWD3-204ENST00000377349 LINC00612Q8N6U2 182 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms