RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 SRIP30626 198 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 C1orf229Q6ZS94 237 aaPredicted RBP6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 OR9G4Q8NGQ1 327 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 FLNCQ14315 2725 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 TRGC2P03986 189 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 C19orf54Q5BKX5 351 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 LINC00477Q96M19 166 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 C17orf77Q96MU5 243 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 YTHDF2Q9Y5A9 579 aaKnown RBP6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 FRYQ5TBA9 3013 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 F5H768 121 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 H7C1H1 209 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 CTSGP08311 255 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 OR10D4PQ8NGN7 298 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 ZNF502Q8TBZ5 544 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 MBD3L1Q8WWY6 194 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 SSBP4Q9BWG4 385 aaPredicted RBP6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 DMXL2Q8TDJ6 3036 aa6.61□□□□□ -1.35
CRNKL1-202ENST00000377340 IGKV1-17P01599 117 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 NUDT11Q96G61 164 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 IMMP2LQ96T52 175 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 MAP1LC3AQ9H492 121 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 HCFC1P51610 2035 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 TRGV11A0A075B6L2 103 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 IGLV11-55A0A075B6I3 123 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 ODF3BA8MYP8 253 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 IGLV2-23P01705 113 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 RPL23P62829 140 aaKnown RBP6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 HBBP68871 147 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 C18orf15Q96N68 181 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 CHCHD5Q9BSY4 110 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 COL6A5A8TX70 2615 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 H3BUA1 57 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 HLA-DQA1P01909 254 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 C9orf66Q5T8R8 295 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 GTF2H5Q6ZYL4 71 aa6.6□□□□□ -1.35
CRNKL1-202ENST00000377340 TEX15Q9BXT5 2789 aa6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 Q6ZS46 218 aa6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 PACRGQ96M98 296 aaPredicted RBP6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 MEGF9Q9H1U4 602 aa6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 IGHV3-16A0A0C4DH30 117 aa6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 IGLV2-14P01704 120 aa6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 DEFB1P60022 68 aa6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 DLX4Q92988 240 aaPredicted RBP6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 ZMAT4Q9H898 229 aa6.59□□□□□ -1.35
CRNKL1-202ENST00000377340 A0A087WWL8 130 aa6.59□□□□□ -1.36
CRNKL1-202ENST00000377340 A0A087WX48 190 aa6.59□□□□□ -1.36
CRNKL1-202ENST00000377340 CD300EQ496F6 205 aaPredicted RBP6.59□□□□□ -1.36
CRNKL1-202ENST00000377340 ZNF876PQ49A33 203 aa6.59□□□□□ -1.36
CRNKL1-202ENST00000377340 MRPL36Q9P0J6 103 aaKnown RBP6.59□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE12BA1L429 117 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE7O76087 117 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE12FP0CL80 117 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE12GP0CL81 117 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE12IP0CL82 117 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 PIFOQ8TCI5 191 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 BOD1L1Q8NFC6 3051 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 TRBV19A0A075B6N1 114 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 FBLL1A6NHQ2 334 aaKnown RBP6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 TEX22C9J3V5 150 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 NDUFA3O95167 84 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 DAD1P61803 113 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 GFI1BQ5VTD9 330 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 UNQ9165/PRO28630Q6UXU0 137 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 TMEM86BQ8N661 226 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 LINC01006Q8NI28 216 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 PRELID3AQ96N28 172 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 MS4A6AQ9H2W1 248 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 FNDC10F2Z333 226 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 I3L2K1 104 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 EVI2AP22794 236 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 SCGB1D4Q6XE38 83 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 TMEM61Q8N0U2 210 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 EIF4E3Q8N5X7 224 aaKnown RBP6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 C14orf178Q8N769 122 aaPredicted RBP6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 NUDT10Q8NFP7 164 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 UNC79Q9P2D8 2635 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 M0R143 59 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 ZNF324O75467 553 aaPredicted RBP6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 MT-ND6P03923 174 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 APOC4P55056 127 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 C1orf194Q5T5A4 169 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 TMEM190Q8WZ59 177 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 CFHR4Q92496 578 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 PRR25Q96S07 402 aa6.58□□□□□ -1.36
CRNKL1-202ENST00000377340 IGKV3D-20A0A0C4DH25 116 aa6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 A0A1B0GW15 77 aa6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 SUMO2P61956 95 aaKnown RBP6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 ASPHD1Q5U4P2 390 aa6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 FANCD2OSQ96PS1 177 aa6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 C2orf70A6NJV1 201 aa6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 DEFB4AO15263 64 aa6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 CRXO43186 299 aaPredicted RBP6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 PRB2P02812 416 aaPredicted RBP6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 GEMIN7Q9H840 131 aaKnown RBP6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 TOMM7Q9P0U1 55 aa6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 KMT2EQ8IZD2 1858 aa6.57□□□□□ -1.36
CRNKL1-202ENST00000377340 ARMS2P0C7Q2 107 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms