RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 CACNA1BQ00975 2339 aa13.43□□□□□ -0.26
TRIM27-201ENST00000377194 NDUFA3O95167 84 aa13.43□□□□□ -0.26
TRIM27-201ENST00000377194 SMIM17P0DL12 118 aa13.42□□□□□ -0.26
TRIM27-201ENST00000377194 Q86TA4 180 aa13.42□□□□□ -0.26
TRIM27-201ENST00000377194 CEACAM3P40198 252 aa13.42□□□□□ -0.26
TRIM27-201ENST00000377194 VMO1Q7Z5L0 202 aa13.42□□□□□ -0.26
TRIM27-201ENST00000377194 A0A1B0GUT8 65 aa13.41□□□□□ -0.26
TRIM27-201ENST00000377194 FXYD2P54710 66 aa13.41□□□□□ -0.26
TRIM27-201ENST00000377194 SRSF8Q9BRL6 282 aaKnown RBP13.41□□□□□ -0.26
TRIM27-201ENST00000377194 ZFHX3Q15911 3703 aa13.41□□□□□ -0.26
TRIM27-201ENST00000377194 NDPQ00604 133 aa13.41□□□□□ -0.26
TRIM27-201ENST00000377194 C5orf64Q2M2E5 130 aa13.41□□□□□ -0.26
TRIM27-201ENST00000377194 GOLT1AQ6ZVE7 132 aa13.41□□□□□ -0.26
TRIM27-201ENST00000377194 EXOC3-AS1Q8N2X6 119 aa13.41□□□□□ -0.26
TRIM27-201ENST00000377194 COL12A1Q99715 3063 aa13.41□□□□□ -0.26
TRIM27-201ENST00000377194 SERTM2A0A1B0GWG4 89 aa13.4□□□□□ -0.26
TRIM27-201ENST00000377194 BCL6BQ8N143 479 aaPredicted RBP13.4□□□□□ -0.26
TRIM27-201ENST00000377194 MTURNQ8N3F0 131 aa13.4□□□□□ -0.26
TRIM27-201ENST00000377194 ATP6V0BQ99437 205 aa13.4□□□□□ -0.26
TRIM27-201ENST00000377194 A0A1B0GV72 72 aa13.4□□□□□ -0.26
TRIM27-201ENST00000377194 GAGE12HA6NDE8 117 aa13.4□□□□□ -0.26
TRIM27-201ENST00000377194 ZNF785A8K8V0 405 aa13.4□□□□□ -0.26
TRIM27-201ENST00000377194 IGLV2-11P01706 119 aa13.4□□□□□ -0.26
TRIM27-201ENST00000377194 C17orf77Q96MU5 243 aa13.4□□□□□ -0.26
TRIM27-201ENST00000377194 VPS13CQ709C8 3753 aa13.39□□□□□ -0.27
TRIM27-201ENST00000377194 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.39□□□□□ -0.27
TRIM27-201ENST00000377194 NDUFS8O00217 210 aa13.39□□□□□ -0.27
TRIM27-201ENST00000377194 SMIM13P0DJ93 91 aa13.39□□□□□ -0.27
TRIM27-201ENST00000377194 RAB9AP51151 201 aa13.39□□□□□ -0.27
TRIM27-201ENST00000377194 WFDC2Q14508 124 aa13.39□□□□□ -0.27
TRIM27-201ENST00000377194 OR9G4Q8NGQ1 327 aa13.39□□□□□ -0.27
TRIM27-201ENST00000377194 FANCD2OSQ96PS1 177 aa13.39□□□□□ -0.27
TRIM27-201ENST00000377194 NCBP2LA6PVI3 153 aaKnown RBP13.38□□□□□ -0.27
TRIM27-201ENST00000377194 CCDC144NLQ6NUI1 221 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 ZNF491Q8N8L2 437 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 OR4X2Q8NGF9 303 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 SIGLEC8Q9NYZ4 499 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 DKK2Q9UBU2 259 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 D6R8Y8 96 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 HOXB4P17483 251 aaPredicted RBP13.38□□□□□ -0.27
TRIM27-201ENST00000377194 RIGQ13278 110 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 SH2D6Q7Z4S9 175 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 SMPXQ9UHP9 88 aa13.38□□□□□ -0.27
TRIM27-201ENST00000377194 ZNF414Q96IQ9 312 aa13.37□□□□□ -0.27
TRIM27-201ENST00000377194 TMEM14CQ9P0S9 112 aa13.37□□□□□ -0.27
TRIM27-201ENST00000377194 ZNF562Q6V9R5 426 aa13.37□□□□□ -0.27
TRIM27-201ENST00000377194 C1orf122Q6ZSJ8 110 aa13.37□□□□□ -0.27
TRIM27-201ENST00000377194 UBTD1Q9HAC8 227 aa13.37□□□□□ -0.27
TRIM27-201ENST00000377194 OTORQ9NRC9 128 aa13.37□□□□□ -0.27
TRIM27-201ENST00000377194 IL4P05112 153 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 CD300EQ496F6 205 aaPredicted RBP13.36□□□□□ -0.27
TRIM27-201ENST00000377194 SHANK2-AS3Q9BTD1 123 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 IGLV11-55A0A075B6I3 123 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 F8W735 103 aaPredicted RBP13.36□□□□□ -0.27
TRIM27-201ENST00000377194 LGALS9BQ3B8N2 356 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 LGALS9CQ6DKI2 356 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 Q8N6K4 173 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 RNF125Q96EQ8 232 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 TMSB15BA0A087X1C1 80 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 IGKV2D-26A0A0A0MRZ7 120 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 C19orf84I3L1E1 186 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 ARPC1AQ92747 370 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 DPF1Q92782 380 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 VGLL1Q99990 258 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 SIRPDQ9H106 197 aa13.36□□□□□ -0.27
TRIM27-201ENST00000377194 NHP2Q9NX24 153 aaKnown RBP13.36□□□□□ -0.27
TRIM27-201ENST00000377194 SMKR1H3BMG3 65 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 H3BRN7 92 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 SCGB1A1P11684 91 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 CKS1BP61024 79 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 PKD1L2Q7Z442 2459 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 CELSR1Q9NYQ6 3014 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 TRAV26-1A0A087WT03 109 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 TMEM213A2RRL7 107 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 ETDBQ3ZM63 59 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 AMN1Q8IY45 258 aa13.35□□□□□ -0.27
TRIM27-201ENST00000377194 SPANXB1Q9NS25 103 aaPredicted RBP13.35□□□□□ -0.27
TRIM27-201ENST00000377194 TRBV19A0A075B6N1 114 aa13.34□□□□□ -0.27
TRIM27-201ENST00000377194 TMEM238LA0A1B0GVL6 79 aa13.34□□□□□ -0.27
TRIM27-201ENST00000377194 IGHV3-23P01764 117 aa13.34□□□□□ -0.27
TRIM27-201ENST00000377194 ATP5G2Q06055 141 aa13.34□□□□□ -0.27
TRIM27-201ENST00000377194 ITLN2Q8WWU7 325 aaPredicted RBP13.34□□□□□ -0.27
TRIM27-201ENST00000377194 NPIPB5A8MRT5 1133 aa13.34□□□□□ -0.27
TRIM27-201ENST00000377194 INSL3P51460 131 aa13.34□□□□□ -0.27
TRIM27-201ENST00000377194 AMTNQ6UX39 209 aa13.34□□□□□ -0.27
TRIM27-201ENST00000377194 PRORYQ9H606 182 aa13.34□□□□□ -0.27
TRIM27-201ENST00000377194 WI2-2373I1.2A0A1W2PRP0 233 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 TMEM189A5PLL7 270 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 MRPS12O15235 138 aaKnown RBP13.33□□□□□ -0.28
TRIM27-201ENST00000377194 SIVA1O15304 175 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 EGR2P11161 476 aaPredicted RBP13.33□□□□□ -0.28
TRIM27-201ENST00000377194 EBI3Q14213 229 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 IFI27L1Q96BM0 104 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 AJUBAQ96IF1 538 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 H3BMG7 143 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 CRIP1P50238 77 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 SCGB2A2Q13296 93 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 TTC9CQ8N5M4 171 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 GATD1Q8NB37 220 aa13.33□□□□□ -0.28
TRIM27-201ENST00000377194 PRELID3AQ96N28 172 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms