RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CHEK1O14757 476 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
TRIM39-202ENST00000376659 IGHV3-23P01764 117 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 IGHV4-39P01824 125 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 RNF185Q96GF1 192 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 GTSF1LQ9H1H1 148 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 A0A1B0GW15 77 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 RBAKDNA6NC62 111 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 FAM106CPP0CH98 169 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 CKS1BP61024 79 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 FOXE3Q13461 319 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 FAM106AQ4KMX7 169 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 HIVEP3Q5T1R4 2406 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 PRAC2D3DTV9 90 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 Q6AWC8 147 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 AMMECR1LQ6DCA0 310 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 BPESC1Q9GZL8 116 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 SELENOKQ9Y6D0 94 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 ATRXP46100 2492 aa7.38□□□□□ -1.23
TRIM39-202ENST00000376659 WNK2Q9Y3S1 2297 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 A0A1B0GUT8 65 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 SYS1-DBNDD2H3BUS1 97 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 SOCS3O14543 225 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 PF4V1P10720 104 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 COL8A1P27658 744 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 LOXL1Q08397 574 aaPredicted RBP7.37□□□□□ -1.23
TRIM39-202ENST00000376659 LINC01545Q5VT33 79 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 IGSF10Q6WRI0 2623 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 TRAV9-2A0A087WT02 112 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 M0R2Z0 102 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 PSG9Q00887 426 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 LY6DQ14210 128 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 CITED1Q99966 193 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 C11orf21Q9P2W6 132 aa7.37□□□□□ -1.23
TRIM39-202ENST00000376659 FAM19A4Q96LR4 140 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 SCRT2Q9NQ03 307 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 MRPS16Q9Y3D3 137 aaKnown RBP7.36□□□□□ -1.23
TRIM39-202ENST00000376659 NCR2O95944 276 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 AZU1P20160 251 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 TSPOP30536 169 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 CFHR3Q02985 330 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 LINC01559Q495D7 138 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
TRIM39-202ENST00000376659 SMPXQ9UHP9 88 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 NPFFO15130 113 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 ZNF138P52744 262 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 HERV-K104P63124 156 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 C15orf32Q32M92 178 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 COL6A6A6NMZ7 2263 aa7.36□□□□□ -1.23
TRIM39-202ENST00000376659 TMEM213A2RRL7 107 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 LYZL1Q6UWQ5 148 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 ATOH7Q8N100 152 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 TMUB1Q9BVT8 246 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 FLNCQ14315 2725 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 A0A096LNT2 108 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 FBLL1A6NHQ2 334 aaKnown RBP7.35□□□□□ -1.23
TRIM39-202ENST00000376659 TMEM70Q9BUB7 260 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 HIF1ANQ9NWT6 349 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 IGHV7-4-1A0A0J9YVY3 117 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 FGF6P10767 208 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 RPS20P60866 119 aaKnown RBP7.35□□□□□ -1.23
TRIM39-202ENST00000376659 FAM104BQ5XKR9 115 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 Q8TAT8 98 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 RABAC1Q9UI14 185 aa7.35□□□□□ -1.23
TRIM39-202ENST00000376659 IGLV2-18A0A075B6J9 118 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 G3V318 75 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 GAS8-AS1O95177 125 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 PPIFP30405 207 aaKnown RBP7.34□□□□□ -1.23
TRIM39-202ENST00000376659 Q56UQ5 140 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 IGFL4Q6B9Z1 124 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 DEFB125Q8N687 156 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 MRPL53Q96EL3 112 aaKnown RBP7.34□□□□□ -1.23
TRIM39-202ENST00000376659 ZNF747Q9BV97 191 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 CACNA1AO00555 2505 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 RPL7P18124 248 aaKnown RBP7.34□□□□□ -1.23
TRIM39-202ENST00000376659 RHOGP84095 191 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 HES1Q14469 280 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 SIGLEC8Q9NYZ4 499 aa7.34□□□□□ -1.23
TRIM39-202ENST00000376659 NCBP2LA6PVI3 153 aaKnown RBP7.34□□□□□ -1.24
TRIM39-202ENST00000376659 IGF1P05019 195 aa7.34□□□□□ -1.24
TRIM39-202ENST00000376659 NTF3P20783 257 aa7.34□□□□□ -1.24
TRIM39-202ENST00000376659 MRPL51Q4U2R6 128 aaKnown RBP7.34□□□□□ -1.24
TRIM39-202ENST00000376659 FER1L6-AS1Q8NA97 138 aa7.34□□□□□ -1.24
TRIM39-202ENST00000376659 GLMPQ8WWB7 406 aa7.34□□□□□ -1.24
TRIM39-202ENST00000376659 UBTD1Q9HAC8 227 aa7.34□□□□□ -1.24
TRIM39-202ENST00000376659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.33□□□□□ -1.24
TRIM39-202ENST00000376659 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 G3V4G9 280 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 HSBP1O75506 76 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 OR5AL1P0C617 328 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 C2orf91Q6ZV80 131 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 ANK3Q12955 4377 aaKnown RBP7.33□□□□□ -1.24
TRIM39-202ENST00000376659 GNLYP22749 145 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 PRR9Q5T870 116 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 Q6ZQT7 251 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 APRG1Q8IVJ8 170 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 C20orf173Q96LM9 149 aa7.33□□□□□ -1.24
TRIM39-202ENST00000376659 SIGMAR1Q99720 223 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms