RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 RBM3P98179 157 aaKnown RBP10.15□□□□□ -0.78
VPS13A-204ENST00000376634 CFHR3Q02985 330 aa10.15□□□□□ -0.78
VPS13A-204ENST00000376634 ZC2HC1BQ5TFG8 222 aa10.15□□□□□ -0.78
VPS13A-204ENST00000376634 DKK1O94907 266 aa10.15□□□□□ -0.79
VPS13A-204ENST00000376634 TP53TG1Q9Y2A0 90 aa10.15□□□□□ -0.79
VPS13A-204ENST00000376634 AMN1Q8IY45 258 aa10.15□□□□□ -0.79
VPS13A-204ENST00000376634 RHPN1-AS1Q9BWJ2 59 aa10.15□□□□□ -0.79
VPS13A-204ENST00000376634 LAIR2Q6ISS4 152 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 Q86TA4 180 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 PKIGQ9Y2B9 76 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 NCOR1P1Q9H4R4 102 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 GAGE1Q13065 139 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 GATA3P23771 443 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 SYNJ2BPP57105 145 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 HAMPP81172 84 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 GGNQ86UU5 652 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 ADAMTS20P59510 1910 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 GATA4P43694 442 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 C5orf47Q569G3 176 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 PRR31Q5SQ13 230 aa10.14□□□□□ -0.79
VPS13A-204ENST00000376634 TMEM243Q9BU79 118 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 A0A0G2JNJ9 132 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 COLCA2A8K830 154 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 Q9UFV3 132 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 FGF16O43320 207 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 TMEM256Q8N2U0 113 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 GAGE12JA6NER3 117 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 E9PQ18 207 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 GAGE4Q13068 117 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 GAGE5Q13069 117 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 GAGE6Q13070 117 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 VWC2Q2TAL6 325 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 ANXA2RQ3ZCQ2 193 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 FNDC10F2Z333 226 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 PFN2P35080 140 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 PAQR4Q8N4S7 273 aaPredicted RBP10.13□□□□□ -0.79
VPS13A-204ENST00000376634 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 BMPERQ8N8U9 685 aa10.13□□□□□ -0.79
VPS13A-204ENST00000376634 TRAV13-2A0A0B4J235 113 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 AZU1P20160 251 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 C9orf118A6NHY6 69 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 PSPNO60542 156 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 MORN5Q5VZ52 161 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 A0A087WV48 116 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 SLC25A16P16260 332 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 TRAV3A0A0B4J244 114 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 J3QRE1 110 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 SCRT2Q9NQ03 307 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 SHISA9B4DS77 424 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 KLF5Q13887 457 aaPredicted RBP10.12□□□□□ -0.79
VPS13A-204ENST00000376634 IGKV1D-8A0A087WSZ0 117 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 H0YIZ8 118 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 CD177Q8N6Q3 437 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 SHANK2-AS3Q9BTD1 123 aa10.12□□□□□ -0.79
VPS13A-204ENST00000376634 IGKV1-27A0A075B6S5 117 aa10.11□□□□□ -0.79
VPS13A-204ENST00000376634 FGFBP3Q8TAT2 258 aa10.11□□□□□ -0.79
VPS13A-204ENST00000376634 PINLYPA6NC86 204 aa10.11□□□□□ -0.79
VPS13A-204ENST00000376634 CHKB-CPT1BH3BT56 60 aa10.11□□□□□ -0.79
VPS13A-204ENST00000376634 PFN1P07737 140 aaKnown RBP10.11□□□□□ -0.79
VPS13A-204ENST00000376634 CRYGSP22914 178 aa10.11□□□□□ -0.79
VPS13A-204ENST00000376634 NBL1P41271 181 aa10.11□□□□□ -0.79
VPS13A-204ENST00000376634 NMSQ5H8A3 153 aa10.11□□□□□ -0.79
VPS13A-204ENST00000376634 IGHV3-16A0A0C4DH30 117 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 FAM231BA6NCW3 169 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 TMEM14EPQ6UXP3 125 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 STPG4Q8N801 248 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 ATP6V0BQ99437 205 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 GAFA1Q96PS6 74 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 PRSS29PA6NIE9 313 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 LINC01619G3V211 115 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 NDUFB8O95169 186 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 XCL2Q9UBD3 114 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 DKK4Q9UBT3 224 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 SPINK13Q1W4C9 94 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
VPS13A-204ENST00000376634 NDUFC2O95298 119 aa10.1□□□□□ -0.79
VPS13A-204ENST00000376634 CFHR2P36980 270 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 SRSF2Q01130 221 aaKnown RBP10.09□□□□□ -0.79
VPS13A-204ENST00000376634 FGF6P10767 208 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 C8orf49Q96NF6 230 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 ZMAT4Q9H898 229 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 GNLYP22749 145 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 OVOL3O00110 214 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 CLPSP04118 112 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 ANKRD29Q8N6D5 301 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 A0A1W2PPI3 338 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 NTF4P34130 210 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 FOXG1P55316 489 aaPredicted RBP10.09□□□□□ -0.79
VPS13A-204ENST00000376634 IGFL4Q6B9Z1 124 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 OR11H6Q8NGC7 330 aa10.09□□□□□ -0.79
VPS13A-204ENST00000376634 LINC00473A8K010 186 aa10.08□□□□□ -0.8
VPS13A-204ENST00000376634 DEFB131AP59861 70 aa10.08□□□□□ -0.8
VPS13A-204ENST00000376634 KLK9Q9UKQ9 250 aa10.08□□□□□ -0.8
VPS13A-204ENST00000376634 IGKV1-5P01602 117 aa10.08□□□□□ -0.8
VPS13A-204ENST00000376634 ZFP36L1Q07352 338 aaKnown RBP10.08□□□□□ -0.8
VPS13A-204ENST00000376634 TSSC4Q9Y5U2 329 aaPredicted RBP10.08□□□□□ -0.8
VPS13A-204ENST00000376634 PRSS57Q6UWY2 283 aa10.08□□□□□ -0.8
VPS13A-204ENST00000376634 TMEM105Q8N8V8 129 aa10.08□□□□□ -0.8
VPS13A-204ENST00000376634 PRSS46E5RG02 174 aa10.08□□□□□ -0.8
VPS13A-204ENST00000376634 SLAQ13239 276 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms