RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 TRAV6A0A075B6T7 132 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 TRGV1A0A0A0MS02 117 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 IGSF23A1L1A6 192 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 C5orf51A6NDU8 294 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 TCRBP04435 133 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 PYYP10082 97 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 HIST1H1EP10412 219 aaKnown RBP10.24□□□□□ -0.77
CLCN6-204ENST00000376491 BAXQ07812 192 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 IL15RAQ13261 267 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 ANXA2RQ3ZCQ2 193 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 Q6ZQT7 251 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 EIF4E3Q8N5X7 224 aaKnown RBP10.24□□□□□ -0.77
CLCN6-204ENST00000376491 TMEM252Q8N6L7 170 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 ZNF680Q8NEM1 530 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 CHAC2Q8WUX2 184 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 C2orf50Q96LR7 162 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 TMEM14CQ9P0S9 112 aa10.24□□□□□ -0.77
CLCN6-204ENST00000376491 LYRM1O43325 122 aa10.23□□□□□ -0.77
CLCN6-204ENST00000376491 SPINK4O60575 86 aa10.23□□□□□ -0.77
CLCN6-204ENST00000376491 RNASE4P34096 147 aaKnown RBP10.23□□□□□ -0.77
CLCN6-204ENST00000376491 SULT1A1P50225 295 aa10.23□□□□□ -0.77
CLCN6-204ENST00000376491 TCL1AP56279 114 aa10.23□□□□□ -0.77
CLCN6-204ENST00000376491 EXOC3-AS1Q8N2X6 119 aa10.23□□□□□ -0.77
CLCN6-204ENST00000376491 C12orf45Q8N5I9 185 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-204ENST00000376491 LINC00477Q96M19 166 aa10.23□□□□□ -0.77
CLCN6-204ENST00000376491 LYRM2Q9NU23 88 aaPredicted RBP10.23□□□□□ -0.77
CLCN6-204ENST00000376491 TP53TG3Q9ULZ0 132 aa10.23□□□□□ -0.77
CLCN6-204ENST00000376491 SIVA1O15304 175 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 CRISP2P16562 243 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 FGF7P21781 194 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 S100A11P31949 105 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 FUSP35637 526 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLCN6-204ENST00000376491 GCSAMLQ5JQS6 135 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 PRR9Q5T870 116 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 C9orf47Q6ZRZ4 202 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 ZFAND2AQ8N6M9 145 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 BLNKQ8WV28 456 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 PRELID1Q9Y255 219 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 TNFRSF18Q9Y5U5 241 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 FAT1Q14517 4588 aa10.22□□□□□ -0.77
CLCN6-204ENST00000376491 IGKV2-40A0A087WW87 121 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-204ENST00000376491 MPDU1O75352 247 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 IGKV2D-40P01614 121 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-204ENST00000376491 IGHV3-53P01767 116 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 PVALBP20472 110 aaPredicted RBP10.21□□□□□ -0.77
CLCN6-204ENST00000376491 S100A10P60903 97 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 RAB32Q13637 225 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 PDE6HQ13956 83 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 ST6GAL2Q96JF0 529 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 VGLL1Q99990 258 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 SLC25A2Q9BXI2 301 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 NUDT15Q9NV35 164 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 TIMM9Q9Y5J7 89 aa10.21□□□□□ -0.77
CLCN6-204ENST00000376491 PAX4O43316 350 aa10.2□□□□□ -0.78
CLCN6-204ENST00000376491 NXPH4O95158 308 aa10.2□□□□□ -0.78
CLCN6-204ENST00000376491 GPX1P07203 203 aa10.2□□□□□ -0.78
CLCN6-204ENST00000376491 ICAM4Q14773 271 aa10.2□□□□□ -0.78
CLCN6-204ENST00000376491 IBA57Q5T440 356 aaKnown RBP10.2□□□□□ -0.78
CLCN6-204ENST00000376491 FAM167A-AS1Q96KT0 104 aa10.2□□□□□ -0.78
CLCN6-204ENST00000376491 MRPL16Q9NX20 251 aaKnown RBP10.2□□□□□ -0.78
CLCN6-204ENST00000376491 ICOSQ9Y6W8 199 aa10.2□□□□□ -0.78
CLCN6-204ENST00000376491 NMBP08949 121 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 HBG1P69891 147 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 HBG2P69892 147 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 ATP6V1FQ16864 119 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 FAM122CQ6P4D5 195 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 MIR17HGQ75NE6 70 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 STX12Q86Y82 276 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 NPCDR1Q9BY65 106 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 ZNF492Q9P255 531 aa10.19□□□□□ -0.78
CLCN6-204ENST00000376491 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
CLCN6-204ENST00000376491 RGS13O14921 159 aa10.18□□□□□ -0.78
CLCN6-204ENST00000376491 CRYBA4P53673 196 aa10.18□□□□□ -0.78
CLCN6-204ENST00000376491 FHL2Q14192 279 aa10.18□□□□□ -0.78
CLCN6-204ENST00000376491 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
CLCN6-204ENST00000376491 AAMDCQ9H7C9 122 aa10.18□□□□□ -0.78
CLCN6-204ENST00000376491 GPN1Q9HCN4 374 aaPredicted RBP10.18□□□□□ -0.78
CLCN6-204ENST00000376491 PRO0255Q9UI72 69 aa10.18□□□□□ -0.78
CLCN6-204ENST00000376491 PRAF2O60831 178 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 H2AFB2P0C5Z0 115 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 NBEAP1P0C6P0 100 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 XGP55808 180 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 NHLH2Q02577 135 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 TMEM78Q5T7P6 136 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 THAP6Q8TBB0 222 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 C8orf49Q96NF6 230 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 PGPEP1Q9NXJ5 209 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 HHLA3Q9XRX5 114 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 HERC1Q15751 4861 aa10.17□□□□□ -0.78
CLCN6-204ENST00000376491 Q8TAT8 98 aa10.16□□□□□ -0.78
CLCN6-204ENST00000376491 FXYD5Q96DB9 178 aa10.16□□□□□ -0.78
CLCN6-204ENST00000376491 ARPC5LQ9BPX5 153 aa10.16□□□□□ -0.78
CLCN6-204ENST00000376491 OR51M1Q9H341 326 aa10.16□□□□□ -0.78
CLCN6-204ENST00000376491 EPM2AB3EWF7 344 aa10.15□□□□□ -0.78
CLCN6-204ENST00000376491 OR10J4P0C629 311 aa10.15□□□□□ -0.78
CLCN6-204ENST00000376491 DNAH10OSP0CZ25 163 aa10.15□□□□□ -0.78
CLCN6-204ENST00000376491 ZNF138P52744 262 aa10.15□□□□□ -0.78
CLCN6-204ENST00000376491 ERVFC1-1P60608 527 aa10.15□□□□□ -0.78
CLCN6-204ENST00000376491 MRPL23Q16540 153 aaKnown RBP10.15□□□□□ -0.78
CLCN6-204ENST00000376491 LYPD1Q8N2G4 141 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms