RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SAMD13Q5VXD3 122 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 PRSS57Q6UWY2 283 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 LYPD1Q8N2G4 141 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
MSH5-202ENST00000375740 CCL19Q99731 98 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 PIEZO1Q92508 2521 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 H3BRM9 83 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 FAM106AQ4KMX7 169 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 C16orf54Q6UWD8 224 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 NPFFR1Q9GZQ6 430 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 GTSF1LQ9H1H1 148 aa10.87□□□□□ -0.67
MSH5-202ENST00000375740 IGHV4-61A0A0C4DH41 118 aa10.86□□□□□ -0.67
MSH5-202ENST00000375740 A8MWL6 223 aa10.86□□□□□ -0.67
MSH5-202ENST00000375740 ASCL2Q99929 193 aa10.86□□□□□ -0.67
MSH5-202ENST00000375740 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
MSH5-202ENST00000375740 OR5AL1P0C617 328 aa10.86□□□□□ -0.67
MSH5-202ENST00000375740 PIMREGQ9BSJ6 248 aa10.86□□□□□ -0.67
MSH5-202ENST00000375740 IGHV3-35A0A0C4DH35 117 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 TRBV6-1A0A0K0K1D8 114 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 G3V318 75 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 M0R3E3 92 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 C15orf32Q32M92 178 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 FAM162BQ5T6X4 162 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 ZNF747Q9BV97 191 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 ZNF785A8K8V0 405 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 AZU1P20160 251 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 FXYD7P58549 80 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 SMAGPQ0VAQ4 97 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 TM4SF20Q53R12 229 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 CT83Q5H943 113 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 TMEM75Q8N9X5 138 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 SVIPQ8NHG7 77 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 C10orf105Q8TEF2 133 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 PSG8Q9UQ74 426 aa10.85□□□□□ -0.67
MSH5-202ENST00000375740 IGHV3OR16-8A0A075B7F1 116 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 TEX48A0A1B0GUV7 120 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 COL8A1P27658 744 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
MSH5-202ENST00000375740 LOXL1Q08397 574 aaPredicted RBP10.84□□□□□ -0.67
MSH5-202ENST00000375740 TMEM219Q86XT9 240 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 ZNF502Q8TBZ5 544 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 NDFIP1Q9BT67 221 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 SPCS1Q9Y6A9 102 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 K7EQM0 130 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 CHEK1O14757 476 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 SCGB2A1O75556 95 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 APOHP02749 345 aaPredicted RBP10.84□□□□□ -0.67
MSH5-202ENST00000375740 PSG3Q16557 428 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 TMEM190Q8WZ59 177 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 HSPB8Q9UJY1 196 aa10.84□□□□□ -0.67
MSH5-202ENST00000375740 IGHV1-69DA0A0B4J2H0 117 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 NPIPB6E9PJ23 425 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 IGHV1-69P01742 117 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 CLEC3BP05452 202 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 BRD3OSQ6XYD6 125 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 C5orf56Q8N8D9 126 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 AAMDCQ9H7C9 122 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 PDE6HQ13956 83 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 KLK9Q2XQG4 91 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 KLK9Q9UKQ9 250 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 SVEP1Q4LDE5 3571 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 ABCA2Q9BZC7 2435 aa10.83□□□□□ -0.68
MSH5-202ENST00000375740 FBLL1A6NHQ2 334 aaKnown RBP10.82□□□□□ -0.68
MSH5-202ENST00000375740 RPL7P18124 248 aaKnown RBP10.82□□□□□ -0.68
MSH5-202ENST00000375740 ATP5J2P56134 94 aa10.82□□□□□ -0.68
MSH5-202ENST00000375740 OR8A1Q8NGG7 326 aa10.82□□□□□ -0.68
MSH5-202ENST00000375740 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
MSH5-202ENST00000375740 SMAD5-AS1Q9Y6J3 95 aa10.82□□□□□ -0.68
MSH5-202ENST00000375740 A0A1W2PPM0 123 aa10.82□□□□□ -0.68
MSH5-202ENST00000375740 A6NDN8 102 aa10.82□□□□□ -0.68
MSH5-202ENST00000375740 PIFOQ8TCI5 191 aa10.82□□□□□ -0.68
MSH5-202ENST00000375740 SPTAN1Q13813 2472 aaKnown RBP10.82□□□□□ -0.68
MSH5-202ENST00000375740 CFAP46Q8IYW2 2715 aa10.82□□□□□ -0.68
MSH5-202ENST00000375740 A0A096LNJ9 63 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 TRAV40A0A0B4J280 105 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 ADAMTSL5Q6ZMM2 481 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 RBPMS2Q6ZRY4 209 aaKnown RBP10.81□□□□□ -0.68
MSH5-202ENST00000375740 PCP2Q8IVA1 136 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 C18orf15Q96N68 181 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 AP5S1Q9NUS5 200 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 IGHV4-30-2A0A087WSY4 118 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 CRIP1P50238 77 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.81□□□□□ -0.68
MSH5-202ENST00000375740 NDUFS8O00217 210 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 CSN1S1P47710 185 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 CLEC19AQ6UXS0 136 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 BOD1L2Q8IYS8 172 aa10.81□□□□□ -0.68
MSH5-202ENST00000375740 SOX21Q9Y651 276 aaPredicted RBP10.81□□□□□ -0.68
MSH5-202ENST00000375740 CCDC140Q96MF4 163 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 C8orf49Q96NF6 230 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 MOB4Q9Y3A3 225 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 CACNA1BQ00975 2339 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 K7EMI3 77 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 IGHV4-38-2P0DP08 117 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 IGFL4Q6B9Z1 124 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 ZFAND3Q9H8U3 227 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 LINC00527Q9UJ94 153 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 IGSF10Q6WRI0 2623 aa10.8□□□□□ -0.68
MSH5-202ENST00000375740 LOC389332A0A1B0GUA5 103 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms