RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 AP5S1Q9NUS5 200 aa13.23□□□□□ -0.29
RXRB-201ENST00000374680 IGSF10Q6WRI0 2623 aa13.23□□□□□ -0.29
RXRB-201ENST00000374680 GAS8-AS1O95177 125 aa13.23□□□□□ -0.29
RXRB-201ENST00000374680 FAM162BQ5T6X4 162 aa13.23□□□□□ -0.29
RXRB-201ENST00000374680 AJUBAQ96IF1 538 aa13.23□□□□□ -0.29
RXRB-201ENST00000374680 MINOS1Q5TGZ0 78 aa13.22□□□□□ -0.29
RXRB-201ENST00000374680 LYPD1Q8N2G4 141 aa13.22□□□□□ -0.29
RXRB-201ENST00000374680 MINOS1-NBL1R4GNA1 71 aa13.22□□□□□ -0.29
RXRB-201ENST00000374680 UBE2E1P51965 193 aa13.22□□□□□ -0.29
RXRB-201ENST00000374680 ITLN2Q8WWU7 325 aaPredicted RBP13.22□□□□□ -0.29
RXRB-201ENST00000374680 COL5A1-AS1Q5SY13 56 aa13.21□□□□□ -0.29
RXRB-201ENST00000374680 ABCA12Q86UK0 2595 aa13.21□□□□□ -0.29
RXRB-201ENST00000374680 IGHV3-11P01762 117 aa13.21□□□□□ -0.3
RXRB-201ENST00000374680 OR5AL1P0C617 328 aa13.21□□□□□ -0.3
RXRB-201ENST00000374680 PSG9Q00887 426 aa13.21□□□□□ -0.3
RXRB-201ENST00000374680 MAP1LC3CQ9BXW4 147 aa13.21□□□□□ -0.3
RXRB-201ENST00000374680 CENPVL3A0A0U1RRI6 287 aa13.2□□□□□ -0.3
RXRB-201ENST00000374680 NPFFO15130 113 aa13.2□□□□□ -0.3
RXRB-201ENST00000374680 IL17RELQ6ZVW7 336 aa13.2□□□□□ -0.3
RXRB-201ENST00000374680 TRAV40A0A0B4J280 105 aa13.2□□□□□ -0.3
RXRB-201ENST00000374680 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
RXRB-201ENST00000374680 CHCHD1Q96BP2 118 aaKnown RBP13.2□□□□□ -0.3
RXRB-201ENST00000374680 CCDC140Q96MF4 163 aa13.2□□□□□ -0.3
RXRB-201ENST00000374680 PRELID3AQ96N28 172 aa13.2□□□□□ -0.3
RXRB-201ENST00000374680 EVI2AP22794 236 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 IGHV4-39P01824 125 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 GATA1P15976 413 aaPredicted RBP13.19□□□□□ -0.3
RXRB-201ENST00000374680 FOXE3Q13461 319 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 DMRTA1Q5VZB9 504 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 C16orf54Q6UWD8 224 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 S100A7AQ86SG5 101 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 ZNF502Q8TBZ5 544 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 NRGNQ92686 78 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 CKS2P33552 79 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 PDE6HQ13956 83 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 EBI3Q14213 229 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 GOLT1BQ9Y3E0 138 aa13.19□□□□□ -0.3
RXRB-201ENST00000374680 DLEU1O43261 78 aa13.18□□□□□ -0.3
RXRB-201ENST00000374680 GOSR1O95249 250 aa13.18□□□□□ -0.3
RXRB-201ENST00000374680 MRPL51Q4U2R6 128 aaKnown RBP13.18□□□□□ -0.3
RXRB-201ENST00000374680 FER1L6-AS1Q8NA97 138 aa13.18□□□□□ -0.3
RXRB-201ENST00000374680 C18orf15Q96N68 181 aa13.18□□□□□ -0.3
RXRB-201ENST00000374680 SIGLEC8Q9NYZ4 499 aa13.18□□□□□ -0.3
RXRB-201ENST00000374680 PTPN13Q12923 2485 aa13.18□□□□□ -0.3
RXRB-201ENST00000374680 BUB3O43684 328 aa13.18□□□□□ -0.3
RXRB-201ENST00000374680 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
RXRB-201ENST00000374680 RPL11P62913 178 aaKnown RBP13.18□□□□□ -0.3
RXRB-201ENST00000374680 MPV17L2Q567V2 206 aa13.17□□□□□ -0.3
RXRB-201ENST00000374680 FAM110DQ8TAY7 271 aaPredicted RBP13.17□□□□□ -0.3
RXRB-201ENST00000374680 IGHV4-61A0A0C4DH41 118 aa13.17□□□□□ -0.3
RXRB-201ENST00000374680 C20orf202A1L168 122 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 HSBP1L1C9JCN9 74 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 TCF21O43680 179 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 NPYP01303 97 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 PRSS57Q6UWY2 283 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 TMEM191AQ9H0A3 160 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 OOSP1A8MZH6 123 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 IGHV4-38-2P0DP08 117 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 FAM104BQ5XKR9 115 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 NUDT3O95989 172 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
RXRB-201ENST00000374680 A0A087X0K7 114 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 CLPSL1A2RUU4 121 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 TRGV3P03979 118 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 IGF1P05019 195 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 Q6ZS46 218 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 ZNF462Q96JM2 2506 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 SRD5A1P18405 259 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 AGPAT4-IT1Q9H0P7 198 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 HSPB8Q9UJY1 196 aa13.15□□□□□ -0.3
RXRB-201ENST00000374680 DOPEY1Q5JWR5 2465 aa13.14□□□□□ -0.31
RXRB-201ENST00000374680 ORMDL3Q8N138 153 aa13.14□□□□□ -0.31
RXRB-201ENST00000374680 GLMPQ8WWB7 406 aa13.14□□□□□ -0.31
RXRB-201ENST00000374680 TRBV6-1A0A0K0K1D8 114 aa13.14□□□□□ -0.31
RXRB-201ENST00000374680 GAGE1Q13065 139 aa13.14□□□□□ -0.31
RXRB-201ENST00000374680 OR10AG1Q8NH19 301 aa13.14□□□□□ -0.31
RXRB-201ENST00000374680 ZNF747Q9BV97 191 aa13.14□□□□□ -0.31
RXRB-201ENST00000374680 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
RXRB-201ENST00000374680 WFDC12Q8WWY7 111 aa13.13□□□□□ -0.31
RXRB-201ENST00000374680 C11orf21Q9P2W6 132 aa13.13□□□□□ -0.31
RXRB-201ENST00000374680 SETD2Q9BYW2 2564 aaPredicted RBP13.13□□□□□ -0.31
RXRB-201ENST00000374680 FABP5P3A8MUU1 101 aa13.13□□□□□ -0.31
RXRB-201ENST00000374680 BLCAPP62952 87 aa13.13□□□□□ -0.31
RXRB-201ENST00000374680 UNQ9165/PRO28630Q6UXU0 137 aa13.13□□□□□ -0.31
RXRB-201ENST00000374680 ZNF575Q86XF7 245 aa13.13□□□□□ -0.31
RXRB-201ENST00000374680 C5orf56Q8N8D9 126 aa13.13□□□□□ -0.31
RXRB-201ENST00000374680 BMI1P35226 326 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 MAPK1IP1LQ8NDC0 245 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 DEFB104AQ8WTQ1 72 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 EEF1AKMT3Q96AZ1 226 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 ZNF48Q96MX3 618 aaPredicted RBP13.12□□□□□ -0.31
RXRB-201ENST00000374680 METTL26Q96S19 204 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 A0A096LNJ9 63 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 TRAV26-2A0A0B4J265 109 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 CACNG7P62955 275 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms