RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ZFP30Q9Y2G7 519 aa11.8□□□□□ -0.52
NIPAL3-204ENST00000374399 BMI1P35226 326 aa11.79□□□□□ -0.52
NIPAL3-204ENST00000374399 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-204ENST00000374399 NUDT10Q8NFP7 164 aa11.79□□□□□ -0.52
NIPAL3-204ENST00000374399 NUDT11Q96G61 164 aa11.79□□□□□ -0.52
NIPAL3-204ENST00000374399 PRR25Q96S07 402 aa11.79□□□□□ -0.52
NIPAL3-204ENST00000374399 PYGO2Q9BRQ0 406 aa11.79□□□□□ -0.52
NIPAL3-204ENST00000374399 AGPAT4-IT1Q9H0P7 198 aa11.79□□□□□ -0.52
NIPAL3-204ENST00000374399 CLEC5AQ9NY25 188 aa11.79□□□□□ -0.52
NIPAL3-204ENST00000374399 PRR27Q6MZM9 219 aa11.78□□□□□ -0.52
NIPAL3-204ENST00000374399 ZNF492Q9P255 531 aa11.78□□□□□ -0.52
NIPAL3-204ENST00000374399 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
NIPAL3-204ENST00000374399 SORL1Q92673 2214 aa11.77□□□□□ -0.52
NIPAL3-204ENST00000374399 K7EQG2 157 aa11.77□□□□□ -0.52
NIPAL3-204ENST00000374399 ZNF705DP0CH99 300 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-204ENST00000374399 ZNF705BP0CI00 300 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-204ENST00000374399 FAM3BP58499 235 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-204ENST00000374399 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.52
NIPAL3-204ENST00000374399 TRBV24-1A0A075B6N3 115 aa11.77□□□□□ -0.53
NIPAL3-204ENST00000374399 A0A1B0GUS0 222 aa11.77□□□□□ -0.53
NIPAL3-204ENST00000374399 CA1P00915 261 aaPredicted RBP11.77□□□□□ -0.53
NIPAL3-204ENST00000374399 NSUN5P1Q3KNT7 163 aa11.77□□□□□ -0.53
NIPAL3-204ENST00000374399 WFDC3Q8IUB2 231 aa11.77□□□□□ -0.53
NIPAL3-204ENST00000374399 ZNF738Q8NE65 137 aa11.77□□□□□ -0.53
NIPAL3-204ENST00000374399 IMMP2LQ96T52 175 aa11.77□□□□□ -0.53
NIPAL3-204ENST00000374399 MAST4O15021 2626 aa11.76□□□□□ -0.53
NIPAL3-204ENST00000374399 FBLL1A6NHQ2 334 aaKnown RBP11.76□□□□□ -0.53
NIPAL3-204ENST00000374399 F6UB75 175 aa11.76□□□□□ -0.53
NIPAL3-204ENST00000374399 NDUFA11Q86Y39 141 aa11.76□□□□□ -0.53
NIPAL3-204ENST00000374399 IL36BQ9NZH7 164 aa11.76□□□□□ -0.53
NIPAL3-204ENST00000374399 TMA7Q9Y2S6 64 aaKnown RBP11.76□□□□□ -0.53
NIPAL3-204ENST00000374399 NPIPB6E9PJ23 425 aa11.75□□□□□ -0.53
NIPAL3-204ENST00000374399 M0QZ24 198 aa11.75□□□□□ -0.53
NIPAL3-204ENST00000374399 RAB5AP20339 215 aa11.75□□□□□ -0.53
NIPAL3-204ENST00000374399 TFPI2P48307 235 aa11.75□□□□□ -0.53
NIPAL3-204ENST00000374399 ZNF80P51504 273 aaPredicted RBP11.75□□□□□ -0.53
NIPAL3-204ENST00000374399 DEFB114Q30KQ6 69 aa11.75□□□□□ -0.53
NIPAL3-204ENST00000374399 TMEM61Q8N0U2 210 aa11.75□□□□□ -0.53
NIPAL3-204ENST00000374399 PPP1R14DQ9NXH3 145 aa11.75□□□□□ -0.53
NIPAL3-204ENST00000374399 OVOL1O14753 267 aa11.74□□□□□ -0.53
NIPAL3-204ENST00000374399 ATRQ13535 2644 aa11.74□□□□□ -0.53
NIPAL3-204ENST00000374399 VWFP04275 2813 aa11.74□□□□□ -0.53
NIPAL3-204ENST00000374399 SMIM27A0A1W2PRY6 76 aa11.74□□□□□ -0.53
NIPAL3-204ENST00000374399 ZNF705GA8MUZ8 300 aaPredicted RBP11.74□□□□□ -0.53
NIPAL3-204ENST00000374399 SAPCD1Q5SSQ6 148 aa11.74□□□□□ -0.53
NIPAL3-204ENST00000374399 SIGLEC8Q9NYZ4 499 aa11.74□□□□□ -0.53
NIPAL3-204ENST00000374399 A0A1W2PPQ1 181 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 GATCO43716 136 aaKnown RBP11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 CT45A10P0DMU9 189 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 ID1P41134 155 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 ZNF138P52744 262 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 CD300EQ496F6 205 aaPredicted RBP11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 SAMD13Q5VXD3 122 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 ZNF575Q86XF7 245 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 OR8A1Q8NGG7 326 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 FAM210BQ96KR6 192 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 FAM19A4Q96LR4 140 aa11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 FBN1P35555 2871 aaKnown RBP11.73□□□□□ -0.53
NIPAL3-204ENST00000374399 RPP21Q9H633 154 aaKnown RBP11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 BIN3Q9NQY0 253 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 AGRNO00468 2067 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 IZUMO1RA6ND01 250 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 SH2D1AO60880 128 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 FRMD6-AS1P0C7T7 363 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 S100PP25815 95 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 PSMG4Q5JS54 123 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 TMEM78Q5T7P6 136 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 CITED1Q99966 193 aa11.72□□□□□ -0.53
NIPAL3-204ENST00000374399 TRAV2A0A0B4J234 112 aa11.71□□□□□ -0.54
NIPAL3-204ENST00000374399 P01737 135 aa11.71□□□□□ -0.54
NIPAL3-204ENST00000374399 RPL19P84098 196 aaKnown RBP11.71□□□□□ -0.54
NIPAL3-204ENST00000374399 CT83Q5H943 113 aa11.71□□□□□ -0.54
NIPAL3-204ENST00000374399 PRR9Q5T870 116 aa11.71□□□□□ -0.54
NIPAL3-204ENST00000374399 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.54
NIPAL3-204ENST00000374399 GTSF1Q8WW33 167 aa11.71□□□□□ -0.54
NIPAL3-204ENST00000374399 LINC00477Q96M19 166 aa11.71□□□□□ -0.54
NIPAL3-204ENST00000374399 PHOX2AO14813 284 aa11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 TYMSP04818 313 aa11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 TCL1AP56279 114 aa11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 HIST1H1AQ02539 215 aaPredicted RBP11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 Q6ZQT7 251 aa11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 ZFAND2AQ8N6M9 145 aa11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 DYNLRB2Q8TF09 96 aa11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 TSKUQ8WUA8 353 aa11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 ZNF256Q9Y2P7 627 aaPredicted RBP11.7□□□□□ -0.54
NIPAL3-204ENST00000374399 KRTAP24-1Q3LI83 254 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 SMUG1Q53HV7 270 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 FAM162BQ5T6X4 162 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 LINC00482Q8N8I6 264 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 OR10J6PQ8NGY7 276 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 SPATA3Q8NHX4 192 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 NEU1Q99519 415 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 GZMBP10144 247 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 RPS10P46783 165 aaKnown RBP11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 RBPMS2Q6ZRY4 209 aaKnown RBP11.69□□□□□ -0.54
NIPAL3-204ENST00000374399 PRIMA1Q86XR5 153 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms