RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 ABCA1O95477 2261 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 IGHV3-35A0A0C4DH35 117 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 ZNF705FA8MVS1 300 aaPredicted RBP9.54□□□□□ -0.88
PRPF4-202ENST00000374199 HOXA3O43365 443 aaPredicted RBP9.54□□□□□ -0.88
PRPF4-202ENST00000374199 SH2D1AO60880 128 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 TCF24Q7RTU0 167 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 UBE2E2Q96LR5 201 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 ALKBH7Q9BT30 221 aaPredicted RBP9.54□□□□□ -0.88
PRPF4-202ENST00000374199 DAZ1Q9NQZ3 744 aaKnown RBP9.54□□□□□ -0.88
PRPF4-202ENST00000374199 TMEM160Q9NX00 188 aa9.54□□□□□ -0.88
PRPF4-202ENST00000374199 IGHV3OR16-8A0A075B7F1 116 aa9.53□□□□□ -0.88
PRPF4-202ENST00000374199 APCSP02743 223 aa9.53□□□□□ -0.88
PRPF4-202ENST00000374199 LGALS1P09382 135 aaKnown RBP9.53□□□□□ -0.88
PRPF4-202ENST00000374199 WFDC12Q8WWY7 111 aa9.53□□□□□ -0.88
PRPF4-202ENST00000374199 NDFIP1Q9BT67 221 aa9.53□□□□□ -0.88
PRPF4-202ENST00000374199 SMPXQ9UHP9 88 aa9.53□□□□□ -0.88
PRPF4-202ENST00000374199 U3KQK5 164 aa9.53□□□□□ -0.88
PRPF4-202ENST00000374199 A0A1B0GV90 55 aa9.52□□□□□ -0.88
PRPF4-202ENST00000374199 CD5LO43866 347 aa9.52□□□□□ -0.88
PRPF4-202ENST00000374199 FABP4P15090 132 aa9.52□□□□□ -0.88
PRPF4-202ENST00000374199 CRISP2P16562 243 aa9.52□□□□□ -0.88
PRPF4-202ENST00000374199 RAB4BP61018 213 aa9.52□□□□□ -0.88
PRPF4-202ENST00000374199 MRPL54Q6P161 138 aaKnown RBP9.52□□□□□ -0.88
PRPF4-202ENST00000374199 A0A1W2PS18 150 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 PF4V1P10720 104 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 SAMD13Q5VXD3 122 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 PRO1933Q9H354 126 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 A0A1B0GUS0 222 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 PAFAH1B2P68402 229 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 RNF182Q8N6D2 247 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 C18orf32Q8TCD1 76 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 DCANP1Q8TF63 244 aa9.52□□□□□ -0.89
PRPF4-202ENST00000374199 DAZAP1Q96EP5 407 aaKnown RBP9.52□□□□□ -0.89
PRPF4-202ENST00000374199 TEX15Q9BXT5 2789 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 F2Z2F3 143 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 RPS20P60866 119 aaKnown RBP9.51□□□□□ -0.89
PRPF4-202ENST00000374199 SLC35B1P78383 322 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 C10orf99Q6UWK7 81 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 TMEM213A2RRL7 107 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 GZMBP10144 247 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 OR2D3Q8NGH3 330 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 TMEM18Q96B42 140 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 ITPR3Q14573 2671 aa9.51□□□□□ -0.89
PRPF4-202ENST00000374199 BMI1P35226 326 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 IGFL4Q6B9Z1 124 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 URB1-AS1Q96HZ7 61 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 C14orf144Q96I85 54 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 GRIFINA4D1Z8 144 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 SERF1AO75920 110 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 ZNF138P52744 262 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 SSBP4Q9BWG4 385 aaPredicted RBP9.5□□□□□ -0.89
PRPF4-202ENST00000374199 NRN1Q9NPD7 142 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 UFC1Q9Y3C8 167 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 IGHV4-4A0A075B6R2 117 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 RPLP1P05386 114 aaKnown RBP9.5□□□□□ -0.89
PRPF4-202ENST00000374199 HIST1H1AQ02539 215 aaPredicted RBP9.5□□□□□ -0.89
PRPF4-202ENST00000374199 LCNL1Q6ZST4 164 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 SIGLECL1Q8N7X8 197 aa9.5□□□□□ -0.89
PRPF4-202ENST00000374199 PTPN13Q12923 2485 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 LOC102724200A0A096LPH7 203 aaPredicted RBP9.49□□□□□ -0.89
PRPF4-202ENST00000374199 A0A1B0GUT8 65 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 IL17RELQ6ZVW7 336 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 KCNS1Q96KK3 526 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 IGHV3-66A0A0C4DH42 116 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 Q8TAT8 98 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 PGLYRP4Q96LB8 373 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 RCHY1Q96PM5 261 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 ASCL2Q99929 193 aa9.49□□□□□ -0.89
PRPF4-202ENST00000374199 MAP1AP78559 2803 aaPredicted RBP9.49□□□□□ -0.89
PRPF4-202ENST00000374199 OVOL1O14753 267 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 ZNF207O43670 478 aaKnown RBP9.48□□□□□ -0.89
PRPF4-202ENST00000374199 CT45A10P0DMU9 189 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 SRIP30626 198 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 ERCC8Q13216 396 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 RHPN1-AS1Q9BWJ2 59 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 SPTAN1Q13813 2472 aaKnown RBP9.48□□□□□ -0.89
PRPF4-202ENST00000374199 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 SPINK4O60575 86 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 GPX1P07203 203 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 TM4SF20Q53R12 229 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 ZFAND2AQ8N6M9 145 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 LINC00477Q96M19 166 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 ODF3Q96PU9 254 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 ARMS2P0C7Q2 107 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 FAM106AQ4KMX7 169 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 TCTEX1D4Q5JR98 221 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 HIST2H2BCQ6DN03 193 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 SPG11Q96JI7 2443 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 C11orf21Q9P2W6 132 aa9.48□□□□□ -0.89
PRPF4-202ENST00000374199 POLQO75417 2590 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 IGKV3D-20A0A0C4DH25 116 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 A8MTW9 85 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 FABP5P3A8MUU1 101 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 Q6ZWC4 215 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 Q8N976 141 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 C16orf95Q9H693 158 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 TMEM189A5PLL7 270 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 SNAI2O43623 268 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms