RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 PLXNB1O43157 2135 aa6.7□□□□□ -1.34
SNRNP40-202ENST00000373720 CACNA1BQ00975 2339 aa6.7□□□□□ -1.34
SNRNP40-202ENST00000373720 KIR2DL5BA0A0G2JN68 375 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 KIR2DL5BA0A0G2JPC4 375 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 SPINK4O60575 86 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 PF4V1P10720 104 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 G0S2P27469 103 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 CRIP1P50238 77 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 TNP2Q05952 138 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 FBLN7Q53RD9 439 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 C9orf152Q5JTZ5 239 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 FAM104BQ5XKR9 115 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 NIT1Q86X76 327 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 TMEM219Q86XT9 240 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 LURAP1LQ8IV03 231 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 APRG1Q8IVJ8 170 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 KIR2DL5AQ8N109 375 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 Q8N2B8 174 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 UBE2E2Q96LR5 201 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 VAMP8Q9BV40 100 aa6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 SSBP4Q9BWG4 385 aaPredicted RBP6.69□□□□□ -1.34
SNRNP40-202ENST00000373720 TRAV21A0A0B4J279 112 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 PRSS47A8MTI9 375 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 ZNF705FA8MVS1 300 aaPredicted RBP6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 H3BTX0 84 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 M0R2Z0 102 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 ZNF705DP0CH99 300 aaPredicted RBP6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 ZNF705BP0CI00 300 aaPredicted RBP6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 LINC00310P59036 64 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 Q6ZWC4 215 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 ZNF664Q8N3J9 261 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 MYOZ3Q8TDC0 251 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 TMEM70Q9BUB7 260 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 AP5S1Q9NUS5 200 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 SMPXQ9UHP9 88 aa6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 HRNRQ86YZ3 2850 aaPredicted RBP6.68□□□□□ -1.34
SNRNP40-202ENST00000373720 LINC01548A6NM66 108 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 M0QZ24 198 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 LEPROTL1O95214 131 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 IGHV3-23P01764 117 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 ORM1P02763 201 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 IGHV4-31P0DP07 118 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 GDF5OSQ5U4N7 250 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 LYZL1Q6UWQ5 148 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 OR10AG1Q8NH19 301 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 PRSS3P2Q8NHM4 247 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 DPF1Q92782 380 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 SGK494Q96LW2 274 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 KRTAP4-12Q9BQ66 201 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 MIEN1Q9BRT3 115 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 MAP1LC3CQ9BXW4 147 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 AGPAT4-IT1Q9H0P7 198 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 NXT2Q9NPJ8 142 aaKnown RBP6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 S4R3C0 116 aa6.67□□□□□ -1.34
SNRNP40-202ENST00000373720 IGKV2-40A0A087WW87 121 aaPredicted RBP6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 TRAV8-2A0A0B4J237 113 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 LINC01546A6NGU7 62 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 LINC00587B1AMM8 73 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 SOCS3O14543 225 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 ZZEF1O43149 2961 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 SNAI2O43623 268 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 NUPR1O60356 82 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 IGKV2D-40P01614 121 aaPredicted RBP6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 ARMS2P0C7Q2 107 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 SNRPD3P62318 126 aaKnown RBP6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 DEFB112Q30KQ8 113 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 KIAA1644Q3SXP7 199 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 FA2HQ7L5A8 372 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 VGLL1Q99990 258 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 RHPN1-AS1Q9BWJ2 59 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 MS4A6AQ9H2W1 248 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 ACACBO00763 2458 aa6.66□□□□□ -1.34
SNRNP40-202ENST00000373720 HSBP1L1C9JCN9 74 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 TCF21O43680 179 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 DUSP14O95147 198 aaKnown RBP6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 SNRPCP09234 159 aaKnown RBP6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 LGALS1P09382 135 aaKnown RBP6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 TSPOP30536 169 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 CKS2P33552 79 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 KRTDAPP60985 99 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 BLCAPP62952 87 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 TWIST1Q15672 202 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 LY6EQ16553 131 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 Q5PR19 223 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 RNASEKQ6P5S7 137 aaKnown RBP6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 BCL6BQ8N143 479 aaPredicted RBP6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 ZNF738Q8NE65 137 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 MRAP2Q96G30 205 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 FAM19A4Q96LR4 140 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 ST20Q9HBF5 79 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 PEMTQ9UBM1 199 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 UQCR10Q9UDW1 63 aa6.65□□□□□ -1.34
SNRNP40-202ENST00000373720 ARHGAP32A7KAX9 2087 aa6.65□□□□□ -1.35
SNRNP40-202ENST00000373720 TRAV9-2A0A087WT02 112 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 M0R143 59 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 FRMD6-AS1P0C7T7 363 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 C3orf79P0CE67 100 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 NTF3P20783 257 aa6.64□□□□□ -1.35
SNRNP40-202ENST00000373720 LEPP41159 167 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms