RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 A0A1W2PS18 150 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 CCL25O15444 150 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 GPR183P32249 361 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 PLP1P60201 277 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 LINC01006Q8NI28 216 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 NUDT11Q96G61 164 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 C9JCJ5 164 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 TMEM238C9JI98 176 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 SCGB2A1O75556 95 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 ZNF138P52744 262 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 RNASEKQ6P5S7 137 aaKnown RBP14.2□□□□□ -0.14
VEGFA-206ENST00000372077 KLHDC1Q8N7A1 406 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 ZNF414Q96IQ9 312 aa14.2□□□□□ -0.14
VEGFA-206ENST00000372077 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.19□□□□□ -0.14
VEGFA-206ENST00000372077 MUC21A0A0G2JKD1 596 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 MUC21A0A140T8X8 626 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 APCSP02743 223 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 LYZP61626 148 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 MUC21Q5SSG8 566 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 TEX43Q6ZNM6 134 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 ERASQ7Z444 233 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 ZNF491Q8N8L2 437 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 TPPP3Q9BW30 176 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 EXOC3-AS1Q8N2X6 119 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 IGF2BP2-AS1Q96M15 143 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 C19orf24Q9BVV8 132 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 ZNF331Q9NQX6 463 aaPredicted RBP14.19□□□□□ -0.14
VEGFA-206ENST00000372077 HIGD1CA8MV81 97 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 PEX7O00628 323 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 GPX1P07203 203 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 CLEC5AQ9NY25 188 aa14.19□□□□□ -0.14
VEGFA-206ENST00000372077 IGHV3-35A0A0C4DH35 117 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 TMEM183BQ1AE95 376 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 NUP35Q8NFH5 326 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 PGLYRP4Q96LB8 373 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 IGHV3-11P01762 117 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 TCTAP57738 103 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 UBE2G1P62253 170 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 MRPL52Q86TS9 123 aaKnown RBP14.18□□□□□ -0.14
VEGFA-206ENST00000372077 C17orf77Q96MU5 243 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 VPS25Q9BRG1 176 aa14.18□□□□□ -0.14
VEGFA-206ENST00000372077 WI2-2373I1.2A0A1W2PRP0 233 aa14.17□□□□□ -0.14
VEGFA-206ENST00000372077 OR4X2Q8NGF9 303 aa14.17□□□□□ -0.14
VEGFA-206ENST00000372077 OR1L4Q8NGR5 311 aa14.17□□□□□ -0.14
VEGFA-206ENST00000372077 TXNDC17Q9BRA2 123 aa14.17□□□□□ -0.14
VEGFA-206ENST00000372077 K7EP13 123 aa14.17□□□□□ -0.14
VEGFA-206ENST00000372077 COL5A1-AS1Q5SY13 56 aa14.17□□□□□ -0.14
VEGFA-206ENST00000372077 FXYD5Q96DB9 178 aa14.17□□□□□ -0.14
VEGFA-206ENST00000372077 PAFAH1B2P68402 229 aa14.16□□□□□ -0.14
VEGFA-206ENST00000372077 RPL19P84098 196 aaKnown RBP14.16□□□□□ -0.14
VEGFA-206ENST00000372077 UBE2E2Q96LR5 201 aa14.16□□□□□ -0.14
VEGFA-206ENST00000372077 CSN3P07498 182 aa14.16□□□□□ -0.14
VEGFA-206ENST00000372077 C3orf79P0CE67 100 aa14.16□□□□□ -0.14
VEGFA-206ENST00000372077 TCTEX1D4Q5JR98 221 aa14.16□□□□□ -0.14
VEGFA-206ENST00000372077 RNF2Q99496 336 aa14.16□□□□□ -0.14
VEGFA-206ENST00000372077 C20orf144Q9BQM9 153 aa14.16□□□□□ -0.14
VEGFA-206ENST00000372077 ALKBH7Q9BT30 221 aaPredicted RBP14.16□□□□□ -0.14
VEGFA-206ENST00000372077 TRBV12-3P01733 135 aa14.15□□□□□ -0.14
VEGFA-206ENST00000372077 TSKUQ8WUA8 353 aa14.15□□□□□ -0.14
VEGFA-206ENST00000372077 PMCHL2Q9BQD1 86 aa14.15□□□□□ -0.14
VEGFA-206ENST00000372077 ARL3P36405 182 aa14.15□□□□□ -0.14
VEGFA-206ENST00000372077 SRSF2Q01130 221 aaKnown RBP14.15□□□□□ -0.14
VEGFA-206ENST00000372077 SPATA45Q537H7 98 aa14.15□□□□□ -0.14
VEGFA-206ENST00000372077 Q8N976 141 aa14.15□□□□□ -0.14
VEGFA-206ENST00000372077 GNB1LQ9BYB4 327 aa14.15□□□□□ -0.14
VEGFA-206ENST00000372077 ZNF586Q9NXT0 402 aa14.15□□□□□ -0.14
VEGFA-206ENST00000372077 MRPL27Q9P0M9 148 aaKnown RBP14.15□□□□□ -0.14
VEGFA-206ENST00000372077 HYPMO75409 117 aa14.14□□□□□ -0.15
VEGFA-206ENST00000372077 RNF125Q96EQ8 232 aa14.14□□□□□ -0.15
VEGFA-206ENST00000372077 A0A1W2PRE2 83 aa14.14□□□□□ -0.15
VEGFA-206ENST00000372077 LINC00173Q6ZV60 143 aa14.14□□□□□ -0.15
VEGFA-206ENST00000372077 STPG4Q8N801 248 aa14.14□□□□□ -0.15
VEGFA-206ENST00000372077 MRPL32Q9BYC8 188 aaKnown RBP14.14□□□□□ -0.15
VEGFA-206ENST00000372077 OSTCQ9NRP0 149 aa14.14□□□□□ -0.15
VEGFA-206ENST00000372077 PEF1Q9UBV8 284 aaKnown RBP14.14□□□□□ -0.15
VEGFA-206ENST00000372077 IL4P05112 153 aa14.14□□□□□ -0.15
VEGFA-206ENST00000372077 PPBPP02775 128 aa14.13□□□□□ -0.15
VEGFA-206ENST00000372077 NBEAP1P0C6P0 100 aa14.13□□□□□ -0.15
VEGFA-206ENST00000372077 PRNTQ86SH4 94 aa14.13□□□□□ -0.15
VEGFA-206ENST00000372077 ZFAND3Q9H8U3 227 aa14.13□□□□□ -0.15
VEGFA-206ENST00000372077 TMSB15BA0A087X1C1 80 aa14.13□□□□□ -0.15
VEGFA-206ENST00000372077 CLPSL1A2RUU4 121 aa14.13□□□□□ -0.15
VEGFA-206ENST00000372077 LGALS1P09382 135 aaKnown RBP14.13□□□□□ -0.15
VEGFA-206ENST00000372077 NIT1Q86X76 327 aa14.13□□□□□ -0.15
VEGFA-206ENST00000372077 C18orf32Q8TCD1 76 aa14.13□□□□□ -0.15
VEGFA-206ENST00000372077 ZNF324O75467 553 aaPredicted RBP14.12□□□□□ -0.15
VEGFA-206ENST00000372077 PROK1P58294 105 aa14.12□□□□□ -0.15
VEGFA-206ENST00000372077 KCNS1Q96KK3 526 aa14.12□□□□□ -0.15
VEGFA-206ENST00000372077 CSTL1Q9H114 145 aa14.12□□□□□ -0.15
VEGFA-206ENST00000372077 HIGD1AQ9Y241 93 aa14.12□□□□□ -0.15
VEGFA-206ENST00000372077 SMIM27A0A1W2PRY6 76 aa14.12□□□□□ -0.15
VEGFA-206ENST00000372077 HSBP1O75506 76 aa14.12□□□□□ -0.15
VEGFA-206ENST00000372077 GOLT1AQ6ZVE7 132 aa14.12□□□□□ -0.15
VEGFA-206ENST00000372077 WFDC12Q8WWY7 111 aa14.12□□□□□ -0.15
VEGFA-206ENST00000372077 IGFL4Q6B9Z1 124 aa14.11□□□□□ -0.15
VEGFA-206ENST00000372077 Q6ZN92 141 aa14.11□□□□□ -0.15
VEGFA-206ENST00000372077 SPATA12Q7Z6I5 190 aa14.11□□□□□ -0.15
VEGFA-206ENST00000372077 CLUHP3Q96NS8 147 aa14.11□□□□□ -0.15
VEGFA-206ENST00000372077 EPDR1Q9UM22 224 aa14.11□□□□□ -0.15
VEGFA-206ENST00000372077 IZUMO1RA6ND01 250 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms