RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 LINC01006Q8NI28 216 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 C4orf3Q8WVX3 66 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 ZC2HC1AQ96GY0 325 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 NEU1Q99519 415 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 CLEC5AQ9NY25 188 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 NAT8BQ9UHF3 227 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 IGHV3-49A0A0A0MS15 119 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 LGALS9O00182 355 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 CHEK1O14757 476 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 RPLP1P05386 114 aaKnown RBP9.91□□□□□ -0.82
LDB3-203ENST00000372056 RAB4BP61018 213 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 SAMD13Q5VXD3 122 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 WDR73Q6P4I2 378 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 UNQ9165/PRO28630Q6UXU0 137 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 GBGT1Q8N5D6 347 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 WIPF2Q8TF74 440 aaPredicted RBP9.91□□□□□ -0.82
LDB3-203ENST00000372056 NDUFAF3Q9BU61 184 aa9.91□□□□□ -0.82
LDB3-203ENST00000372056 MRPL18Q9H0U6 180 aaKnown RBP9.91□□□□□ -0.82
LDB3-203ENST00000372056 IGKV2-40A0A087WW87 121 aaPredicted RBP9.9□□□□□ -0.82
LDB3-203ENST00000372056 HIGD1CA8MV81 97 aa9.9□□□□□ -0.82
LDB3-203ENST00000372056 SNURFLB1AK76 121 aa9.9□□□□□ -0.82
LDB3-203ENST00000372056 IGKV2D-40P01614 121 aaPredicted RBP9.9□□□□□ -0.82
LDB3-203ENST00000372056 MT-ND6P03923 174 aa9.9□□□□□ -0.82
LDB3-203ENST00000372056 COX19Q49B96 90 aa9.9□□□□□ -0.82
LDB3-203ENST00000372056 IGFL4Q6B9Z1 124 aa9.9□□□□□ -0.82
LDB3-203ENST00000372056 MRPL54Q6P161 138 aaKnown RBP9.9□□□□□ -0.82
LDB3-203ENST00000372056 C16orf54Q6UWD8 224 aa9.9□□□□□ -0.82
LDB3-203ENST00000372056 TMEM136Q6ZRR5 245 aa9.9□□□□□ -0.82
LDB3-203ENST00000372056 DAZAP1Q96EP5 407 aaKnown RBP9.9□□□□□ -0.82
LDB3-203ENST00000372056 RNF114Q9Y508 228 aa9.9□□□□□ -0.82
LDB3-203ENST00000372056 TSSC4Q9Y5U2 329 aaPredicted RBP9.9□□□□□ -0.82
LDB3-203ENST00000372056 FLNBO75369 2602 aaKnown RBP9.9□□□□□ -0.83
LDB3-203ENST00000372056 FBLL1A6NHQ2 334 aaKnown RBP9.89□□□□□ -0.83
LDB3-203ENST00000372056 A8MWL6 223 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 HLA-DMBP28068 263 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 RASL11AQ6T310 242 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 OR4B1Q8NGF8 309 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 DPF1Q92782 380 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 ASCL2Q99929 193 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 SLC50A1Q9BRV3 221 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 DAZ1Q9NQZ3 744 aaKnown RBP9.89□□□□□ -0.83
LDB3-203ENST00000372056 ZNF705FA8MVS1 300 aaPredicted RBP9.89□□□□□ -0.83
LDB3-203ENST00000372056 ZNF124Q15973 351 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 LCN12Q6JVE5 192 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 COX8CQ7Z4L0 72 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 ZNF664Q8N3J9 261 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 GLMPQ8WWB7 406 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 GFRA4Q9GZZ7 299 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 OTOGQ6ZRI0 2925 aa9.89□□□□□ -0.83
LDB3-203ENST00000372056 AKAP9Q99996 3911 aa9.88□□□□□ -0.83
LDB3-203ENST00000372056 GTSF1Q8WW33 167 aa9.88□□□□□ -0.83
LDB3-203ENST00000372056 ACANP16112 2415 aa9.88□□□□□ -0.83
LDB3-203ENST00000372056 SONP18583 2426 aaKnown RBP9.87□□□□□ -0.83
LDB3-203ENST00000372056 TRAV8-2A0A0B4J237 113 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 FAM231BA6NCW3 169 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 HLA-DQA1P01909 254 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 CRIP1P50238 77 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 C10orf99Q6UWK7 81 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 C8orf86Q6ZUL3 223 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 TCF24Q7RTU0 167 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 RNF182Q8N6D2 247 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 C8orf49Q96NF6 230 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 VGLL1Q99990 258 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 PEMTQ9UBM1 199 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 A0A1B0GXF2 115 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 LINC01619G3V211 115 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 SAPCD1Q5SSQ6 148 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 ATP5L2Q7Z4Y8 100 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 OR2D3Q8NGH3 330 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 PRR25Q96S07 402 aa9.87□□□□□ -0.83
LDB3-203ENST00000372056 ZNF469Q96JG9 3925 aaPredicted RBP9.87□□□□□ -0.83
LDB3-203ENST00000372056 RBAKDNA6NC62 111 aa9.86□□□□□ -0.83
LDB3-203ENST00000372056 M0QZ24 198 aa9.86□□□□□ -0.83
LDB3-203ENST00000372056 CT45A10P0DMU9 189 aa9.86□□□□□ -0.83
LDB3-203ENST00000372056 PROK1P58294 105 aa9.86□□□□□ -0.83
LDB3-203ENST00000372056 RBPMS2Q6ZRY4 209 aaKnown RBP9.86□□□□□ -0.83
LDB3-203ENST00000372056 Q8TAT8 98 aa9.86□□□□□ -0.83
LDB3-203ENST00000372056 MRPL53Q96EL3 112 aaKnown RBP9.86□□□□□ -0.83
LDB3-203ENST00000372056 GRIFINA4D1Z8 144 aa9.85□□□□□ -0.83
LDB3-203ENST00000372056 PRAC2D3DTV9 90 aa9.85□□□□□ -0.83
LDB3-203ENST00000372056 NUTF2P61970 127 aaKnown RBP9.85□□□□□ -0.83
LDB3-203ENST00000372056 GDF5OSQ5U4N7 250 aa9.85□□□□□ -0.83
LDB3-203ENST00000372056 OR1N2Q8NGR9 330 aa9.85□□□□□ -0.83
LDB3-203ENST00000372056 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
LDB3-203ENST00000372056 CRISP2P16562 243 aa9.85□□□□□ -0.83
LDB3-203ENST00000372056 FOXA3P55318 350 aaPredicted RBP9.85□□□□□ -0.83
LDB3-203ENST00000372056 KLHL30-AS1Q8NEE0 82 aa9.85□□□□□ -0.83
LDB3-203ENST00000372056 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
LDB3-203ENST00000372056 HBBP68871 147 aa9.84□□□□□ -0.83
LDB3-203ENST00000372056 KLF5Q13887 457 aaPredicted RBP9.84□□□□□ -0.83
LDB3-203ENST00000372056 KHDC1LQ5JSQ8 128 aa9.84□□□□□ -0.83
LDB3-203ENST00000372056 FAM162BQ5T6X4 162 aa9.84□□□□□ -0.83
LDB3-203ENST00000372056 PGLYRP4Q96LB8 373 aa9.84□□□□□ -0.83
LDB3-203ENST00000372056 SMPXQ9UHP9 88 aa9.84□□□□□ -0.83
LDB3-203ENST00000372056 TCAPO15273 167 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 SH2D1AO60880 128 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 APCSP02743 223 aa9.83□□□□□ -0.84
LDB3-203ENST00000372056 HOXD3P31249 432 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms