RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RPH3ALQ9UNE2 315 aa8.99□□□□□ -0.97
TSPAN1-201ENST00000372003 CT45A10P0DMU9 189 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 DLX1P56177 255 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 C10orf55Q5SWW7 151 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 S100A7AQ86SG5 101 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 OR5A1Q8NGJ0 315 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 MALRD1Q5VYJ5 2156 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 ZANQ9Y493 2812 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 FBLL1A6NHQ2 334 aaKnown RBP8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 INAFM1C9JVW0 142 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 K7EP34 96 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 SLC25A17O43808 307 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 SMIM17P0DL12 118 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 SGK494Q96LW2 274 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 SLC25A39Q9BZJ4 359 aaPredicted RBP8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 ZNRD1Q9P1U0 126 aa8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 F11RQ9Y624 299 aaKnown RBP8.98□□□□□ -0.97
TSPAN1-201ENST00000372003 IGHV3OR16-10A0A075B7F0 116 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 J3QLI3 93 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 COX8CQ7Z4L0 72 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 PRNTQ86SH4 94 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 FER1L6-AS1Q8NA97 138 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 SRSF12Q8WXF0 261 aaKnown RBP8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 RNF5Q99942 180 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 SIRPDQ9H106 197 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 CSPG4Q6UVK1 2322 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 TNCP24821 2201 aa8.97□□□□□ -0.97
TSPAN1-201ENST00000372003 ARHGAP32A7KAX9 2087 aa8.96□□□□□ -0.97
TSPAN1-201ENST00000372003 TRBV19A0A075B6N1 114 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 G3V4G9 280 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 CD24P25063 80 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 DLX6P56179 175 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 PSG3Q16557 428 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 GOLT1AQ6ZVE7 132 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 VMO1Q7Z5L0 202 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 TP73-AS1Q9UF72 201 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 PSG8Q9UQ74 426 aa8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 CHTOPQ9Y3Y2 248 aaKnown RBP8.96□□□□□ -0.98
TSPAN1-201ENST00000372003 ABCA1O95477 2261 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 A0A1W2PRD5 423 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 A0A1W2PRF3 423 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 A0A1W2PRM7 423 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 ZNF785A8K8V0 405 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 M0R1W7 72 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 ARMS2P0C7Q2 107 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 ZNF138P52744 262 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 ZC2HC1AQ96GY0 325 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 SHANK2-AS3Q9BTD1 123 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 F8P00451 2351 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
TSPAN1-201ENST00000372003 TRAV40A0A0B4J280 105 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 H3BRN7 92 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 IGHV3-48P01763 117 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 HBDP02042 147 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 CSN3P07498 182 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 KLRD1Q13241 179 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 PDE6HQ13956 83 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 FAM104BQ5XKR9 115 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 HCP5Q6MZN7 132 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 CFAP161Q6P656 301 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 NEGR1Q7Z3B1 354 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 ORMDL3Q8N138 153 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 OR2K2Q8NGT1 345 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 RASL11BQ9BPW5 248 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 MEGF9Q9H1U4 602 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 RABAC1Q9UI14 185 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 SIGLEC9Q9Y336 463 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 A0A096LNJ9 63 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 LINC01546A6NGU7 62 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 IGHV1-8P0DP01 117 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 IGHV4-38-2P0DP08 117 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 PRTN3P24158 256 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 COX7A1P24310 79 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 LYZP61626 148 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 SRSF2Q01130 221 aaKnown RBP8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 PLGLAQ15195 96 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 KLF17Q5JT82 389 aaPredicted RBP8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 SIGLEC15Q6ZMC9 328 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 ADAMTSL5Q6ZMM2 481 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 C1orf122Q6ZSJ8 110 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 ERASQ7Z444 233 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 TMEM160Q9NX00 188 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 HIGD1BQ9P298 99 aa8.94□□□□□ -0.98
TSPAN1-201ENST00000372003 SVEP1Q4LDE5 3571 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 TRAV8-1A0A0A6YYK1 113 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 A0A0G2JLM5 398 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 CENPVL3A0A0U1RRI6 287 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 I3L2K1 104 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 NCR2O95944 276 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 RUSC1-AS1Q66K80 236 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 BRD3OSQ6XYD6 125 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 PRELID3AQ96N28 172 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 TPSG1Q9NRR2 321 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 SIGLEC8Q9NYZ4 499 aa8.93□□□□□ -0.98
TSPAN1-201ENST00000372003 TEX22C9J3V5 150 aa8.92□□□□□ -0.98
TSPAN1-201ENST00000372003 H0Y8G0 127 aa8.92□□□□□ -0.98
TSPAN1-201ENST00000372003 HLA-DRB4P13762 266 aa8.92□□□□□ -0.98
TSPAN1-201ENST00000372003 TMEM11P17152 192 aa8.92□□□□□ -0.98
TSPAN1-201ENST00000372003 IFI27P40305 119 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms