RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.25□□□□□ -0.29
SSBP3-203ENST00000371319 KLHL30-AS1Q8NEE0 82 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BHQ93079 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BNQ99877 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 HIST1H2BMQ99879 126 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 AGPAT4-IT1Q9H0P7 198 aa13.25□□□□□ -0.29
SSBP3-203ENST00000371319 C2orf70A6NJV1 201 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 FOSL1P15407 271 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 ZNF738Q8NE65 137 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 NUP35Q8NFH5 326 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 OR1N2Q8NGR9 330 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 WFDC12Q8WWY7 111 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 NEU1Q99519 415 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 IGKV3-7A0A075B6H7 116 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 C5orf52A6NGY3 159 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 INAFM1C9JVW0 142 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 SPINK4O60575 86 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 NDUFA7O95182 113 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 CD28P10747 220 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 FABP9Q0Z7S8 132 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 ADAMTSL5Q6ZMM2 481 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 C9orf47Q6ZRZ4 202 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 OR11H1Q8NG94 326 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 NAT8BQ9UHF3 227 aa13.24□□□□□ -0.29
SSBP3-203ENST00000371319 OTOGQ6ZRI0 2925 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 A8MWL6 223 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 SH2D1AO60880 128 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 CT45A10P0DMU9 189 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 CBLN1P23435 193 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 ZNF80P51504 273 aaPredicted RBP13.23□□□□□ -0.29
SSBP3-203ENST00000371319 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
SSBP3-203ENST00000371319 OR2D3Q8NGH3 330 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 DCANP1Q8TF63 244 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 GTSF1Q8WW33 167 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 DUX3Q96PT4 197 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 JMJD8Q96S16 334 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 GFRA4Q9GZZ7 299 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 SAV1Q9H4B6 383 aaPredicted RBP13.23□□□□□ -0.29
SSBP3-203ENST00000371319 TRAPPC1Q9Y5R8 145 aa13.23□□□□□ -0.29
SSBP3-203ENST00000371319 HIGD1CA8MV81 97 aa13.22□□□□□ -0.29
SSBP3-203ENST00000371319 ZNF138P52744 262 aa13.22□□□□□ -0.29
SSBP3-203ENST00000371319 DPF1Q92782 380 aa13.22□□□□□ -0.29
SSBP3-203ENST00000371319 NDFIP1Q9BT67 221 aa13.22□□□□□ -0.29
SSBP3-203ENST00000371319 PPP1R14DQ9NXH3 145 aa13.22□□□□□ -0.29
SSBP3-203ENST00000371319 OVOL1O14753 267 aa13.21□□□□□ -0.29
SSBP3-203ENST00000371319 S100A6P06703 90 aa13.21□□□□□ -0.29
SSBP3-203ENST00000371319 RPL19P84098 196 aaKnown RBP13.21□□□□□ -0.29
SSBP3-203ENST00000371319 SMUG1Q53HV7 270 aa13.21□□□□□ -0.29
SSBP3-203ENST00000371319 FAM162BQ5T6X4 162 aa13.21□□□□□ -0.29
SSBP3-203ENST00000371319 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
SSBP3-203ENST00000371319 GZMBP10144 247 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 TMEM78Q5T7P6 136 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 TMEM136Q6ZRR5 245 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 GNB1LQ9BYB4 327 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 MS4A6AQ9H2W1 248 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 ZNF705DP0CH99 300 aaPredicted RBP13.2□□□□□ -0.3
SSBP3-203ENST00000371319 ZNF705BP0CI00 300 aaPredicted RBP13.2□□□□□ -0.3
SSBP3-203ENST00000371319 NDUFA6P56556 154 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 DEFB1P60022 68 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 SAMD13Q5VXD3 122 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 C11orf44Q8N8P7 122 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 DLX4Q92988 240 aaPredicted RBP13.2□□□□□ -0.3
SSBP3-203ENST00000371319 RAX2Q96IS3 184 aa13.2□□□□□ -0.3
SSBP3-203ENST00000371319 SNURFLB1AK76 121 aa13.19□□□□□ -0.3
SSBP3-203ENST00000371319 UBE2CO00762 179 aa13.19□□□□□ -0.3
SSBP3-203ENST00000371319 ID1P41134 155 aa13.19□□□□□ -0.3
SSBP3-203ENST00000371319 COX19Q49B96 90 aa13.19□□□□□ -0.3
SSBP3-203ENST00000371319 WFDC3Q8IUB2 231 aa13.19□□□□□ -0.3
SSBP3-203ENST00000371319 CITED2Q99967 270 aaPredicted RBP13.19□□□□□ -0.3
SSBP3-203ENST00000371319 MRPL18Q9H0U6 180 aaKnown RBP13.19□□□□□ -0.3
SSBP3-203ENST00000371319 CUBNO60494 3623 aa13.18□□□□□ -0.3
SSBP3-203ENST00000371319 A0A1B0GXF2 115 aa13.18□□□□□ -0.3
SSBP3-203ENST00000371319 K7EQG2 157 aa13.18□□□□□ -0.3
SSBP3-203ENST00000371319 FOXA3P55318 350 aaPredicted RBP13.18□□□□□ -0.3
SSBP3-203ENST00000371319 WDR73Q6P4I2 378 aa13.18□□□□□ -0.3
SSBP3-203ENST00000371319 RASL11AQ6T310 242 aa13.18□□□□□ -0.3
SSBP3-203ENST00000371319 RBPMS2Q6ZRY4 209 aaKnown RBP13.18□□□□□ -0.3
SSBP3-203ENST00000371319 OR9G4Q8NGQ1 327 aa13.18□□□□□ -0.3
SSBP3-203ENST00000371319 PGLYRP4Q96LB8 373 aa13.18□□□□□ -0.3
SSBP3-203ENST00000371319 A0A1W2PRX2 142 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 TMEM189A5PLL7 270 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 M0QZ24 198 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 CSN3P07498 182 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 FHL3Q13643 280 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 GDF5OSQ5U4N7 250 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 OR8A1Q8NGG7 326 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 OR10J6PQ8NGY7 276 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 LINC00477Q96M19 166 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 PEMTQ9UBM1 199 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
SSBP3-203ENST00000371319 HIVEP2P31629 2446 aa13.17□□□□□ -0.3
SSBP3-203ENST00000371319 F6UB75 175 aa13.16□□□□□ -0.3
SSBP3-203ENST00000371319 HAX1O00165 279 aa13.16□□□□□ -0.3
SSBP3-203ENST00000371319 PROK1P58294 105 aa13.16□□□□□ -0.3
SSBP3-203ENST00000371319 SRSF2Q01130 221 aaKnown RBP13.16□□□□□ -0.3
SSBP3-203ENST00000371319 FAM19A4Q96LR4 140 aa13.16□□□□□ -0.3
SSBP3-203ENST00000371319 RNF114Q9Y508 228 aa13.16□□□□□ -0.3
SSBP3-203ENST00000371319 LENEPQ9Y5L5 61 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms