RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 IGKV1-39P01597 117 aa17.68■□□□□ 0.42
TM9SF3-201ENST00000371142 IGKV1D-39P04432 117 aa17.68■□□□□ 0.42
TM9SF3-201ENST00000371142 SDHAF1A6NFY7 115 aa17.67■□□□□ 0.42
TM9SF3-201ENST00000371142 NXPH4O95158 308 aa17.67■□□□□ 0.42
TM9SF3-201ENST00000371142 LURAP1LQ8IV03 231 aa17.67■□□□□ 0.42
TM9SF3-201ENST00000371142 H3BRN7 92 aa17.67■□□□□ 0.42
TM9SF3-201ENST00000371142 VWA8A3KMH1 1905 aa17.67■□□□□ 0.42
TM9SF3-201ENST00000371142 NDUFA4O00483 81 aa17.66■□□□□ 0.42
TM9SF3-201ENST00000371142 HAPLN4Q86UW8 402 aa17.66■□□□□ 0.42
TM9SF3-201ENST00000371142 CDKN1BP46527 198 aa17.66■□□□□ 0.42
TM9SF3-201ENST00000371142 NKAPP1Q8N9T2 125 aa17.66■□□□□ 0.42
TM9SF3-201ENST00000371142 NDUFS6O75380 124 aaKnown RBP17.66■□□□□ 0.42
TM9SF3-201ENST00000371142 IGLV3-9A0A075B6K5 115 aa17.66■□□□□ 0.42
TM9SF3-201ENST00000371142 EREGO14944 169 aa17.66■□□□□ 0.42
TM9SF3-201ENST00000371142 MMP23AO75900 390 aa17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 SPINK8P0C7L1 97 aa17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 WT1-ASQ06250 92 aa17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 THAP8Q8NA92 274 aa17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 PRR25Q96S07 402 aa17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 TCF20Q9UGU0 1960 aaKnown RBP17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 TMEM243Q9BU79 118 aa17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 CFPP27918 469 aa17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 TMEM126AQ9H061 195 aa17.65■□□□□ 0.42
TM9SF3-201ENST00000371142 CT83Q5H943 113 aa17.64■□□□□ 0.42
TM9SF3-201ENST00000371142 FAM231BA6NCW3 169 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 SUMO4Q6EEV6 95 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 HLA-DRB4P13762 266 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 SLAQ13239 276 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 HLA-DRB4X5D2U9 266 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 ZNF134P52741 427 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 ZNF524Q96C55 264 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 COX11Q9Y6N1 276 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 THSD7BQ9C0I4 1608 aa17.64■□□□□ 0.41
TM9SF3-201ENST00000371142 C1orf147Q96MC9 270 aaPredicted RBP17.63■□□□□ 0.41
TM9SF3-201ENST00000371142 PLXNA3P51805 1871 aa17.63■□□□□ 0.41
TM9SF3-201ENST00000371142 H3BMM0 161 aa17.63■□□□□ 0.41
TM9SF3-201ENST00000371142 IGFL3Q6UXB1 125 aa17.63■□□□□ 0.41
TM9SF3-201ENST00000371142 UBE2WQ96B02 151 aa17.63■□□□□ 0.41
TM9SF3-201ENST00000371142 C15orf65H3BRN8 121 aa17.62■□□□□ 0.41
TM9SF3-201ENST00000371142 SIP14410 1827 aa17.62■□□□□ 0.41
TM9SF3-201ENST00000371142 EP300Q09472 2414 aaPredicted RBP17.62■□□□□ 0.41
TM9SF3-201ENST00000371142 V9GYV3 84 aa17.62■□□□□ 0.41
TM9SF3-201ENST00000371142 IGHV1-24A0A0C4DH33 117 aa17.62■□□□□ 0.41
TM9SF3-201ENST00000371142 SOCS3O14543 225 aa17.62■□□□□ 0.41
TM9SF3-201ENST00000371142 ETV2O00321 342 aaPredicted RBP17.61■□□□□ 0.41
TM9SF3-201ENST00000371142 ZC2HC1AQ96GY0 325 aa17.61■□□□□ 0.41
TM9SF3-201ENST00000371142 CLPSL2Q6UWE3 100 aa17.61■□□□□ 0.41
TM9SF3-201ENST00000371142 ZSWIM8A7E2V4 1837 aa17.61■□□□□ 0.41
TM9SF3-201ENST00000371142 CGB3P0DN86 165 aa17.61■□□□□ 0.41
TM9SF3-201ENST00000371142 APOC4P55056 127 aa17.61■□□□□ 0.41
TM9SF3-201ENST00000371142 MORN5Q5VZ52 161 aa17.61■□□□□ 0.41
TM9SF3-201ENST00000371142 RNASE13Q5GAN3 156 aaKnown RBP17.6■□□□□ 0.41
TM9SF3-201ENST00000371142 SMIM27A0A1W2PRY6 76 aa17.6■□□□□ 0.41
TM9SF3-201ENST00000371142 FNDC1Q4ZHG4 1894 aaPredicted RBP17.6■□□□□ 0.41
TM9SF3-201ENST00000371142 TRAV25A0A0B4J276 109 aa17.6■□□□□ 0.41
TM9SF3-201ENST00000371142 CNOT1A5YKK6 2376 aaKnown RBP17.6■□□□□ 0.41
TM9SF3-201ENST00000371142 SPTBN2O15020 2390 aa17.6■□□□□ 0.41
TM9SF3-201ENST00000371142 LINC00311Q8N616 119 aa17.6■□□□□ 0.41
TM9SF3-201ENST00000371142 RBMY1FQ15415 496 aaKnown RBP17.59■□□□□ 0.41
TM9SF3-201ENST00000371142 TMEM14CQ9P0S9 112 aa17.59■□□□□ 0.41
TM9SF3-201ENST00000371142 IGF2BP2-AS1Q96M15 143 aa17.59■□□□□ 0.41
TM9SF3-201ENST00000371142 MRPL52Q86TS9 123 aaKnown RBP17.59■□□□□ 0.41
TM9SF3-201ENST00000371142 TICRRQ7Z2Z1 1910 aa17.59■□□□□ 0.41
TM9SF3-201ENST00000371142 NCOR1P1Q9H4R4 102 aa17.59■□□□□ 0.41
TM9SF3-201ENST00000371142 SIGLEC8Q9NYZ4 499 aa17.59■□□□□ 0.41
TM9SF3-201ENST00000371142 VWC2Q2TAL6 325 aa17.58■□□□□ 0.4
TM9SF3-201ENST00000371142 NPYP01303 97 aa17.58■□□□□ 0.4
TM9SF3-201ENST00000371142 IGHV7-4-1A0A0J9YVY3 117 aa17.57■□□□□ 0.4
TM9SF3-201ENST00000371142 IGLV1-44P01699 117 aa17.57■□□□□ 0.4
TM9SF3-201ENST00000371142 NDUFA12Q9UI09 145 aa17.57■□□□□ 0.4
TM9SF3-201ENST00000371142 A8MWP6 167 aa17.57■□□□□ 0.4
TM9SF3-201ENST00000371142 FAM215AQ9Y5M1 114 aa17.57■□□□□ 0.4
TM9SF3-201ENST00000371142 SCRT2Q9NQ03 307 aa17.57■□□□□ 0.4
TM9SF3-201ENST00000371142 J3QLI3 93 aa17.56■□□□□ 0.4
TM9SF3-201ENST00000371142 FXYD5Q96DB9 178 aa17.56■□□□□ 0.4
TM9SF3-201ENST00000371142 Q6ZWC4 215 aa17.56■□□□□ 0.4
TM9SF3-201ENST00000371142 COL6A6A6NMZ7 2263 aa17.56■□□□□ 0.4
TM9SF3-201ENST00000371142 PI4KAP42356 2102 aa17.56■□□□□ 0.4
TM9SF3-201ENST00000371142 KLF5Q13887 457 aaPredicted RBP17.56■□□□□ 0.4
TM9SF3-201ENST00000371142 PRSS29PA6NIE9 313 aa17.56■□□□□ 0.4
TM9SF3-201ENST00000371142 MRPL35Q9NZE8 188 aaKnown RBP17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 VOPP1Q96AW1 172 aa17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 DOPEY2Q9Y3R5 2298 aa17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 E9PQ18 207 aa17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 ANGP03950 147 aaKnown RBP17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 IGLC1P0CG04 106 aa17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 FGF6P10767 208 aa17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 HLA-DMBP28068 263 aa17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 RSPO1Q2MKA7 263 aaPredicted RBP17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 C17orf77Q96MU5 243 aa17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 SPTBN1Q01082 2364 aaKnown RBP17.55■□□□□ 0.4
TM9SF3-201ENST00000371142 WIPF3A6NGB9 483 aa17.54■□□□□ 0.4
TM9SF3-201ENST00000371142 FAM231DQ6ZW35 169 aa17.54■□□□□ 0.4
TM9SF3-201ENST00000371142 C20orf144Q9BQM9 153 aa17.54■□□□□ 0.4
TM9SF3-201ENST00000371142 HOXD3P31249 432 aaPredicted RBP17.54■□□□□ 0.4
TM9SF3-201ENST00000371142 IGFBPL1Q8WX77 278 aa17.54■□□□□ 0.4
TM9SF3-201ENST00000371142 CGB7P0DN87 165 aa17.54■□□□□ 0.4
TM9SF3-201ENST00000371142 F6UB75 175 aa17.53■□□□□ 0.4
TM9SF3-201ENST00000371142 ATP6V0BQ99437 205 aa17.53■□□□□ 0.4
TM9SF3-201ENST00000371142 HOXB4P17483 251 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms