RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 TNFRSF14Q92956 283 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 C20orf78Q9BR46 151 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 SIGLEC9Q9Y336 463 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 CEP295Q9C0D2 2601 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 TRBV19A0A075B6N1 114 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 TNFRSF6BO95407 300 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 EGR2P11161 476 aaPredicted RBP8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 PRTN3P24158 256 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 BMI1P35226 326 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 DEFB124Q8NES8 71 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 CSPG4Q6UVK1 2322 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 POU2AF1Q16633 256 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 CT83Q5H943 113 aa8.24□□□□□ -1.09
PRPF38B-201ENST00000370021 BSPH1Q075Z2 132 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 COLQQ9Y215 455 aaPredicted RBP8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 C17orf100A8MU93 164 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 SCGB2A1O75556 95 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 CRIP1P50238 77 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 RPS20P60866 119 aaKnown RBP8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 SCGB3A1Q96QR1 104 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 SPAG8Q99932 426 aaPredicted RBP8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 PLSCR4Q9NRQ2 329 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 KLF12Q9Y4X4 402 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 IGHV3-64A0A075B6Q5 118 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 TIMM23O14925 209 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 HOXA3O43365 443 aaPredicted RBP8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 ZNF833PQ6ZTB9 187 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 GLMPQ8WWB7 406 aa8.23□□□□□ -1.09
PRPF38B-201ENST00000370021 CGB3P0DN86 165 aa8.22□□□□□ -1.09
PRPF38B-201ENST00000370021 CGB7P0DN87 165 aa8.22□□□□□ -1.09
PRPF38B-201ENST00000370021 UBALD2Q8IYN6 164 aa8.22□□□□□ -1.09
PRPF38B-201ENST00000370021 RAXQ9Y2V3 346 aa8.22□□□□□ -1.09
PRPF38B-201ENST00000370021 APOBEC3AP31941 199 aaPredicted RBP8.22□□□□□ -1.09
PRPF38B-201ENST00000370021 NCOR1P1Q9H4R4 102 aa8.22□□□□□ -1.09
PRPF38B-201ENST00000370021 C7orf69Q9H7B7 122 aa8.22□□□□□ -1.09
PRPF38B-201ENST00000370021 LINC01549A6NIU2 74 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 C16orf97H3BN30 126 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 FGF6P10767 208 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 C12orf74Q32Q52 190 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 NEGR1Q7Z3B1 354 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 TNRC6BQ9UPQ9 1833 aaKnown RBP8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 IGLL5B9A064 214 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 IGKV1-17P01599 117 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 IGHV1-8P0DP01 117 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 MFAP4P55083 255 aa8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 C1orf162Q8NEQ5 155 aaPredicted RBP8.21□□□□□ -1.09
PRPF38B-201ENST00000370021 ZNF815PA8K554 130 aa8.21□□□□□ -1.1
PRPF38B-201ENST00000370021 FABP5P3A8MUU1 101 aa8.21□□□□□ -1.1
PRPF38B-201ENST00000370021 CRYBA4P53673 196 aa8.21□□□□□ -1.1
PRPF38B-201ENST00000370021 KLRD1Q13241 179 aa8.21□□□□□ -1.1
PRPF38B-201ENST00000370021 TMEM170BQ5T4T1 132 aa8.21□□□□□ -1.1
PRPF38B-201ENST00000370021 UFSP1Q6NVU6 142 aa8.21□□□□□ -1.1
PRPF38B-201ENST00000370021 CEND1Q8N111 149 aa8.21□□□□□ -1.1
PRPF38B-201ENST00000370021 THAP8Q8NA92 274 aa8.21□□□□□ -1.1
PRPF38B-201ENST00000370021 IGHV1-3A0A0C4DH29 117 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 HLA-DRB4P13762 266 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 HTN1P15515 57 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 Q6AWC8 147 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 RAX2Q96IS3 184 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 LINC00527Q9UJ94 153 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 HLA-DRB4X5D2U9 266 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 PRRG2O14669 202 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 PRSS2P07478 247 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 MAPKAPK5-AS1Q8N8E1 139 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 PRSS33Q8NF86 280 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 LHBP01229 141 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 ANAPC13Q9BS18 74 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 SHANK2-AS3Q9BTD1 123 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 C21orf62Q9NYP8 219 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 SS18L2Q9UHA2 77 aa8.2□□□□□ -1.1
PRPF38B-201ENST00000370021 A0A1B0GW15 77 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 IGLV1-44P01699 117 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 TMEM78Q5T7P6 136 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 SIGLEC15Q6ZMC9 328 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 ABHD17AQ96GS6 310 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 MYCNOSP40205 109 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 ZNF80P51504 273 aaPredicted RBP8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 NDPQ00604 133 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 KLHL30-AS1Q8NEE0 82 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 PRR25Q96S07 402 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 A0A096LNJ9 63 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 CCDC144NLQ6NUI1 221 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 DTX2Q86UW9 622 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 ZNF491Q8N8L2 437 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 CTSZQ9UBR2 303 aa8.19□□□□□ -1.1
PRPF38B-201ENST00000370021 ATP5LO75964 103 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 FAM74A4Q5TZK3 123 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 FOXI2Q6ZQN5 318 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 IL17RELQ6ZVW7 336 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 NXT2Q9NPJ8 142 aaKnown RBP8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 TRAV8-2A0A0B4J237 113 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 IGLV2-23P01705 113 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 IGLV2-11P01706 119 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 CHTOPQ9Y3Y2 248 aaKnown RBP8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 TMEM178BH3BS89 294 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 TRGV3P03979 118 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 DLX6P56179 175 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 GFRALQ6UXV0 394 aa8.18□□□□□ -1.1
PRPF38B-201ENST00000370021 TRBV20-1A0A075B6N2 111 aa8.17□□□□□ -1.1
PRPF38B-201ENST00000370021 FAM90A27PA6NNH2 459 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms