RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SHANK2-AS3Q9BTD1 123 aa9.65□□□□□ -0.86
PHGDH-201ENST00000369407 ZGRF1Q86YA3 2104 aa9.65□□□□□ -0.86
PHGDH-201ENST00000369407 WI2-2373I1.2A0A1W2PRP0 233 aa9.65□□□□□ -0.86
PHGDH-201ENST00000369407 ZNF883P0CG24 379 aa9.65□□□□□ -0.86
PHGDH-201ENST00000369407 ZNF80P51504 273 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-201ENST00000369407 ASH1LQ9NR48 2969 aaKnown RBP9.65□□□□□ -0.86
PHGDH-201ENST00000369407 LEPP41159 167 aa9.65□□□□□ -0.87
PHGDH-201ENST00000369407 CEP295Q9C0D2 2601 aa9.64□□□□□ -0.87
PHGDH-201ENST00000369407 A0A1B0GWB2 263 aa9.64□□□□□ -0.87
PHGDH-201ENST00000369407 ZNF493Q6ZR52 646 aa9.64□□□□□ -0.87
PHGDH-201ENST00000369407 ZNF491Q8N8L2 437 aa9.64□□□□□ -0.87
PHGDH-201ENST00000369407 RNF125Q96EQ8 232 aa9.64□□□□□ -0.87
PHGDH-201ENST00000369407 PAX8Q06710 450 aa9.64□□□□□ -0.87
PHGDH-201ENST00000369407 ARHGAP32A7KAX9 2087 aa9.64□□□□□ -0.87
PHGDH-201ENST00000369407 IGHV1-3A0A0C4DH29 117 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 H3BRN7 92 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 K7EIM0 57 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 DLX6P56179 175 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 CHAC1Q9BUX1 264 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 COL25A1Q9BXS0 654 aaPredicted RBP9.63□□□□□ -0.87
PHGDH-201ENST00000369407 MED13LQ71F56 2210 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 APC2O95996 2303 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 CRYGBP07316 175 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 BSPH1Q075Z2 132 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 SYT8Q8NBV8 401 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 VGLL1Q99990 258 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 U3KQK5 164 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 ORM1P02763 201 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 SCGB1A1P11684 91 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 TMEM155Q4W5P6 130 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 PVRIGQ6DKI7 326 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 LINC00311Q8N616 119 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 GATD1Q8NB37 220 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 DPF1Q92782 380 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 FOXC2Q99958 501 aa9.63□□□□□ -0.87
PHGDH-201ENST00000369407 A0A1B0GW15 77 aa9.62□□□□□ -0.87
PHGDH-201ENST00000369407 ANAPC13Q9BS18 74 aa9.62□□□□□ -0.87
PHGDH-201ENST00000369407 AAMDCQ9H7C9 122 aa9.62□□□□□ -0.87
PHGDH-201ENST00000369407 TMEM160Q9NX00 188 aa9.62□□□□□ -0.87
PHGDH-201ENST00000369407 MT-ATP8P03928 68 aa9.62□□□□□ -0.87
PHGDH-201ENST00000369407 CLEC3BP05452 202 aa9.62□□□□□ -0.87
PHGDH-201ENST00000369407 UFC1Q9Y3C8 167 aa9.62□□□□□ -0.87
PHGDH-201ENST00000369407 AGRNO00468 2067 aa9.62□□□□□ -0.87
PHGDH-201ENST00000369407 C16orf97H3BN30 126 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 K7EM74 188 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 ZNF562Q6V9R5 426 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 BSNQ9UPA5 3926 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 TRBV25-1A0A075B6N4 114 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
PHGDH-201ENST00000369407 ODF1Q14990 250 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 ZC2HC1BQ5TFG8 222 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 Q6AWC8 147 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 GLMPQ8WWB7 406 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 CUL9Q8IWT3 2517 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 SIVA1O15304 175 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 RPEQ96AT9 228 aa9.61□□□□□ -0.87
PHGDH-201ENST00000369407 MRPL16Q9NX20 251 aaKnown RBP9.61□□□□□ -0.87
PHGDH-201ENST00000369407 TGFAP01135 160 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 ERCC8Q13216 396 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 MAPKAPK5-AS1Q8N8E1 139 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 SPANXB1Q9NS25 103 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-201ENST00000369407 ABCA4P78363 2273 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 TRAV40A0A0B4J280 105 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 IGFL2Q6UWQ7 119 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 TMEM158Q8WZ71 300 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 DYNLRB1Q9NP97 96 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 AKAP13Q12802 2813 aa9.6□□□□□ -0.87
PHGDH-201ENST00000369407 TRBV6-1A0A0K0K1D8 114 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 TMEM8BA6NDV4 472 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 BUB1B-PAK6H3BSN5 160 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 RNF185Q96GF1 192 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 PRR25Q96S07 402 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 TRAV26-2A0A0B4J265 109 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 C19orf67A6NJJ6 358 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 GFRALQ6UXV0 394 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 FAM90A27PA6NNH2 459 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 TIMM23O14925 209 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 TNFRSF6BO95407 300 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 APOMO95445 188 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 IGKCP01834 107 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 ZNF575Q86XF7 245 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 C3orf56Q8N813 242 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 ZNF479Q96JC4 524 aa9.59□□□□□ -0.87
PHGDH-201ENST00000369407 ZNF418Q8TF45 676 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-201ENST00000369407 PHLDA1Q8WV24 401 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-201ENST00000369407 TRBV20-1A0A075B6N2 111 aa9.58□□□□□ -0.88
PHGDH-201ENST00000369407 IGHV3OR16-13A0A075B7E8 117 aa9.58□□□□□ -0.88
PHGDH-201ENST00000369407 IGHV3-74A0A0B4J1X5 117 aa9.58□□□□□ -0.88
PHGDH-201ENST00000369407 IGHV3-66A0A0C4DH42 116 aa9.58□□□□□ -0.88
PHGDH-201ENST00000369407 TNFRSF13BO14836 293 aaPredicted RBP9.58□□□□□ -0.88
PHGDH-201ENST00000369407 IGLV1-47P01700 117 aa9.58□□□□□ -0.88
PHGDH-201ENST00000369407 ANKRD11Q6UB99 2663 aaPredicted RBP9.57□□□□□ -0.88
PHGDH-201ENST00000369407 NDUFA3O95167 84 aa9.57□□□□□ -0.88
PHGDH-201ENST00000369407 NUP37Q8NFH4 326 aa9.57□□□□□ -0.88
PHGDH-201ENST00000369407 MRPL35Q9NZE8 188 aaKnown RBP9.57□□□□□ -0.88
PHGDH-201ENST00000369407 A6NJY4 79 aa9.57□□□□□ -0.88
PHGDH-201ENST00000369407 HES1Q14469 280 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms