RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 RBPMS2Q6ZRY4 209 aaKnown RBP17.91■□□□□ 0.46
SNX3-203ENST00000368979 C9orf47Q6ZRZ4 202 aa17.91■□□□□ 0.46
SNX3-203ENST00000368979 OR10G8Q8NGN5 311 aa17.91■□□□□ 0.46
SNX3-203ENST00000368979 ASCL2Q99929 193 aa17.91■□□□□ 0.46
SNX3-203ENST00000368979 OSTCQ9NRP0 149 aa17.91■□□□□ 0.46
SNX3-203ENST00000368979 CXorf65A6NEN9 183 aa17.9■□□□□ 0.46
SNX3-203ENST00000368979 PF4P02776 101 aa17.9■□□□□ 0.46
SNX3-203ENST00000368979 ERVFC1-1P60608 527 aa17.9■□□□□ 0.46
SNX3-203ENST00000368979 FAM231DQ6ZW35 169 aa17.9■□□□□ 0.46
SNX3-203ENST00000368979 Q8TAT8 98 aa17.9■□□□□ 0.46
SNX3-203ENST00000368979 PRR25Q96S07 402 aa17.9■□□□□ 0.46
SNX3-203ENST00000368979 AGPAT4-IT1Q9H0P7 198 aa17.9■□□□□ 0.46
SNX3-203ENST00000368979 NIPBLQ6KC79 2804 aaeCLIP17.9■□□□□ 0.46
SNX3-203ENST00000368979 CD300EQ496F6 205 aaPredicted RBP17.89■□□□□ 0.45
SNX3-203ENST00000368979 SAPCD1Q5SSQ6 148 aa17.89■□□□□ 0.45
SNX3-203ENST00000368979 COX8CQ7Z4L0 72 aa17.89■□□□□ 0.45
SNX3-203ENST00000368979 LINC00482Q8N8I6 264 aa17.89■□□□□ 0.45
SNX3-203ENST00000368979 RNASE7Q9H1E1 156 aaKnown RBP17.89■□□□□ 0.45
SNX3-203ENST00000368979 BIN3Q9NQY0 253 aa17.89■□□□□ 0.45
SNX3-203ENST00000368979 TRAV25A0A0B4J276 109 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 SNRPD3P62318 126 aaKnown RBP17.88■□□□□ 0.45
SNX3-203ENST00000368979 IBA57Q5T440 356 aaKnown RBP17.88■□□□□ 0.45
SNX3-203ENST00000368979 PRR27Q6MZM9 219 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 ZC2HC1AQ96GY0 325 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 PPP1R14DQ9NXH3 145 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 ZNF492Q9P255 531 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 NPIPB6E9PJ23 425 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 ZNF688P0C7X2 276 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 LINC00322Q6ZN03 302 aaPredicted RBP17.88■□□□□ 0.45
SNX3-203ENST00000368979 C15orf54Q8N8G6 183 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 OR8A1Q8NGG7 326 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 C8orf49Q96NF6 230 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 YPEL4Q96NS1 127 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 GPR61Q9BZJ8 451 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 V9GYV3 84 aa17.88■□□□□ 0.45
SNX3-203ENST00000368979 DEFB1P60022 68 aa17.87■□□□□ 0.45
SNX3-203ENST00000368979 PSMG4Q5JS54 123 aa17.87■□□□□ 0.45
SNX3-203ENST00000368979 TMEM78Q5T7P6 136 aa17.87■□□□□ 0.45
SNX3-203ENST00000368979 OR10J6PQ8NGY7 276 aa17.87■□□□□ 0.45
SNX3-203ENST00000368979 C19orf71A6NCJ1 209 aa17.86■□□□□ 0.45
SNX3-203ENST00000368979 ZNF705DP0CH99 300 aaPredicted RBP17.86■□□□□ 0.45
SNX3-203ENST00000368979 ZNF705BP0CI00 300 aaPredicted RBP17.86■□□□□ 0.45
SNX3-203ENST00000368979 ZNF138P52744 262 aa17.86■□□□□ 0.45
SNX3-203ENST00000368979 SPAG8Q99932 426 aaPredicted RBP17.86■□□□□ 0.45
SNX3-203ENST00000368979 NDFIP1Q9BT67 221 aa17.86■□□□□ 0.45
SNX3-203ENST00000368979 F6UB75 175 aa17.85■□□□□ 0.45
SNX3-203ENST00000368979 SAP30O75446 220 aa17.85■□□□□ 0.45
SNX3-203ENST00000368979 NUDT10Q8NFP7 164 aa17.85■□□□□ 0.45
SNX3-203ENST00000368979 NUDT11Q96G61 164 aa17.85■□□□□ 0.45
SNX3-203ENST00000368979 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.84■□□□□ 0.45
SNX3-203ENST00000368979 LINC00477Q96M19 166 aa17.84■□□□□ 0.45
SNX3-203ENST00000368979 IZUMO1RA6ND01 250 aa17.83■□□□□ 0.45
SNX3-203ENST00000368979 HIST1H1AQ02539 215 aaPredicted RBP17.83■□□□□ 0.45
SNX3-203ENST00000368979 ELOBQ15370 118 aa17.83■□□□□ 0.45
SNX3-203ENST00000368979 LENEPQ9Y5L5 61 aa17.83■□□□□ 0.45
SNX3-203ENST00000368979 COLCA2A8K830 154 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 IGLV1-51P01701 117 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 PFN1P07737 140 aaKnown RBP17.82■□□□□ 0.44
SNX3-203ENST00000368979 CRIP1P50238 77 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 IMMP2LQ96T52 175 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 ZNF256Q9Y2P7 627 aaPredicted RBP17.82■□□□□ 0.44
SNX3-203ENST00000368979 URGCP-MRPS24S4R325 110 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 OR4C46A6NHA9 309 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 GATCO43716 136 aaKnown RBP17.82■□□□□ 0.44
SNX3-203ENST00000368979 CT45A10P0DMU9 189 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 OR2K2Q8NGT1 345 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 JMJD1CQ15652 2540 aa17.82■□□□□ 0.44
SNX3-203ENST00000368979 ZNF705GA8MUZ8 300 aaPredicted RBP17.81■□□□□ 0.44
SNX3-203ENST00000368979 SMUG1Q53HV7 270 aa17.81■□□□□ 0.44
SNX3-203ENST00000368979 GDF5OSQ5U4N7 250 aa17.81■□□□□ 0.44
SNX3-203ENST00000368979 FAM19A4Q96LR4 140 aa17.81■□□□□ 0.44
SNX3-203ENST00000368979 ZNF747Q9BV97 191 aa17.81■□□□□ 0.44
SNX3-203ENST00000368979 IL36BQ9NZH7 164 aa17.81■□□□□ 0.44
SNX3-203ENST00000368979 A0A0J9YX75 114 aa17.8■□□□□ 0.44
SNX3-203ENST00000368979 DAZAP1Q96EP5 407 aaKnown RBP17.8■□□□□ 0.44
SNX3-203ENST00000368979 P01737 135 aa17.79■□□□□ 0.44
SNX3-203ENST00000368979 S100PP25815 95 aa17.79■□□□□ 0.44
SNX3-203ENST00000368979 ZNF80P51504 273 aaPredicted RBP17.79■□□□□ 0.44
SNX3-203ENST00000368979 SAV1Q9H4B6 383 aaPredicted RBP17.79■□□□□ 0.44
SNX3-203ENST00000368979 RPP21Q9H633 154 aaKnown RBP17.79■□□□□ 0.44
SNX3-203ENST00000368979 TRBV7-9A0A0J9YWB2 115 aa17.78■□□□□ 0.44
SNX3-203ENST00000368979 DEFB131AP59861 70 aa17.78■□□□□ 0.44
SNX3-203ENST00000368979 KCNIP4Q6PIL6 250 aa17.78■□□□□ 0.44
SNX3-203ENST00000368979 FOXI2Q6ZQN5 318 aa17.78■□□□□ 0.44
SNX3-203ENST00000368979 OR4B1Q8NGF8 309 aa17.78■□□□□ 0.44
SNX3-203ENST00000368979 MAP6D1Q9H9H5 199 aa17.78■□□□□ 0.44
SNX3-203ENST00000368979 SH2D1AO60880 128 aa17.77■□□□□ 0.44
SNX3-203ENST00000368979 CT83Q5H943 113 aa17.77■□□□□ 0.44
SNX3-203ENST00000368979 FAM162BQ5T6X4 162 aa17.77■□□□□ 0.44
SNX3-203ENST00000368979 EBLN2Q6P2I7 272 aa17.77■□□□□ 0.44
SNX3-203ENST00000368979 TGIF2-C20orf24A0A0A6YYL0 155 aa17.77■□□□□ 0.43
SNX3-203ENST00000368979 CA1P00915 261 aaPredicted RBP17.77■□□□□ 0.43
SNX3-203ENST00000368979 CXCL1P09341 107 aa17.77■□□□□ 0.43
SNX3-203ENST00000368979 CD33P20138 364 aa17.77■□□□□ 0.43
SNX3-203ENST00000368979 ZFAND2AQ8N6M9 145 aa17.77■□□□□ 0.43
SNX3-203ENST00000368979 PYGO2Q9BRQ0 406 aa17.77■□□□□ 0.43
SNX3-203ENST00000368979 TRBV24-1A0A075B6N3 115 aa17.76■□□□□ 0.43
SNX3-203ENST00000368979 FAM3BP58499 235 aaPredicted RBP17.76■□□□□ 0.43
SNX3-203ENST00000368979 SPATA3Q8NHX4 192 aa17.76■□□□□ 0.43
SNX3-203ENST00000368979 SMIM27A0A1W2PRY6 76 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms