RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 APOBP04114 4563 aaKnown RBP11.05□□□□□ -0.64
CKS1B-202ENST00000368436 HIST1H1EP10412 219 aaKnown RBP11.05□□□□□ -0.64
CKS1B-202ENST00000368436 BAXQ07812 192 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 ERCC8Q13216 396 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 TMEM252Q8N6L7 170 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 MAPKAPK5-AS1Q8N8E1 139 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 ZNF680Q8NEM1 530 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 VSIG2Q96IQ7 327 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 LINC00477Q96M19 166 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 GSN-AS1Q9NRJ2 163 aa11.05□□□□□ -0.64
CKS1B-202ENST00000368436 PDE6HQ13956 83 aa11.04□□□□□ -0.64
CKS1B-202ENST00000368436 ATP6V1FQ16864 119 aa11.04□□□□□ -0.64
CKS1B-202ENST00000368436 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
CKS1B-202ENST00000368436 AGPAT4-IT1Q9H0P7 198 aa11.04□□□□□ -0.64
CKS1B-202ENST00000368436 NUDT15Q9NV35 164 aa11.04□□□□□ -0.64
CKS1B-202ENST00000368436 A0A096LPF7 62 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 CRISP2P16562 243 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 HBG1P69891 147 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 HBG2P69892 147 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 CD300CQ08708 224 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 BTN1A1Q13410 526 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 RAB32Q13637 225 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 STX12Q86Y82 276 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 EIF4E3Q8N5X7 224 aaKnown RBP11.03□□□□□ -0.64
CKS1B-202ENST00000368436 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 DNAH5Q8TE73 4624 aa11.03□□□□□ -0.64
CKS1B-202ENST00000368436 TRGV2A0A075B6R0 118 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 SPINK4O60575 86 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 MPDU1O75352 247 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 NMBP08949 121 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 H2AFB2P0C5Z0 115 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 PYYP10082 97 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 FGF7P21781 194 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 S100A10P60903 97 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 Q8N1X5 172 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 EXOC3-AS1Q8N2X6 119 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 FUT9Q9Y231 359 aa11.02□□□□□ -0.65
CKS1B-202ENST00000368436 TRGV1A0A0A0MS02 117 aa11.01□□□□□ -0.65
CKS1B-202ENST00000368436 RNASE4P34096 147 aaKnown RBP11.01□□□□□ -0.65
CKS1B-202ENST00000368436 TCL1AP56279 114 aa11.01□□□□□ -0.65
CKS1B-202ENST00000368436 KRTAP10-2P60368 255 aa11.01□□□□□ -0.65
CKS1B-202ENST00000368436 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
CKS1B-202ENST00000368436 KLF12Q9Y4X4 402 aa11.01□□□□□ -0.65
CKS1B-202ENST00000368436 GPX1P07203 203 aa11□□□□□ -0.65
CKS1B-202ENST00000368436 GCSAMLQ5JQS6 135 aa11□□□□□ -0.65
CKS1B-202ENST00000368436 ZFAND2AQ8N6M9 145 aa11□□□□□ -0.65
CKS1B-202ENST00000368436 BLNKQ8WV28 456 aa11□□□□□ -0.65
CKS1B-202ENST00000368436 FAM167A-AS1Q96KT0 104 aa11□□□□□ -0.65
CKS1B-202ENST00000368436 SLC25A2Q9BXI2 301 aa11□□□□□ -0.65
CKS1B-202ENST00000368436 NPCDR1Q9BY65 106 aa11□□□□□ -0.65
CKS1B-202ENST00000368436 AAMDCQ9H7C9 122 aa11□□□□□ -0.65
CKS1B-202ENST00000368436 GPN1Q9HCN4 374 aaPredicted RBP11□□□□□ -0.65
CKS1B-202ENST00000368436 LINC00315P59091 139 aa10.99□□□□□ -0.65
CKS1B-202ENST00000368436 ICAM4Q14773 271 aa10.99□□□□□ -0.65
CKS1B-202ENST00000368436 Q6ZRN7 208 aaPredicted RBP10.99□□□□□ -0.65
CKS1B-202ENST00000368436 VGLL1Q99990 258 aa10.99□□□□□ -0.65
CKS1B-202ENST00000368436 CCDC32Q9BV29 185 aa10.99□□□□□ -0.65
CKS1B-202ENST00000368436 IGKV2-40A0A087WW87 121 aaPredicted RBP10.98□□□□□ -0.65
CKS1B-202ENST00000368436 IGKV2D-40P01614 121 aaPredicted RBP10.98□□□□□ -0.65
CKS1B-202ENST00000368436 NBEAP1P0C6P0 100 aa10.98□□□□□ -0.65
CKS1B-202ENST00000368436 NHLH2Q02577 135 aa10.98□□□□□ -0.65
CKS1B-202ENST00000368436 TMEM78Q5T7P6 136 aa10.98□□□□□ -0.65
CKS1B-202ENST00000368436 PRR9Q5T870 116 aa10.98□□□□□ -0.65
CKS1B-202ENST00000368436 ST6GAL2Q96JF0 529 aa10.98□□□□□ -0.65
CKS1B-202ENST00000368436 ZNF492Q9P255 531 aa10.98□□□□□ -0.65
CKS1B-202ENST00000368436 TP53TG3Q9ULZ0 132 aa10.98□□□□□ -0.65
CKS1B-202ENST00000368436 IGHV1OR15-1A0A075B7D0 117 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 FAM240BA0A1B0GVZ2 78 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 SIVA1O15304 175 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 PAX4O43316 350 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 FAM122CQ6P4D5 195 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 Q6ZQT7 251 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 MIR17HGQ75NE6 70 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 OR51M1Q9H341 326 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 SCRT2Q9NQ03 307 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 NDUFA13Q9P0J0 144 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 ICOSQ9Y6W8 199 aa10.97□□□□□ -0.65
CKS1B-202ENST00000368436 TRBV7-9A0A0J9YWB2 115 aa10.96□□□□□ -0.65
CKS1B-202ENST00000368436 RGS13O14921 159 aa10.96□□□□□ -0.65
CKS1B-202ENST00000368436 OR5C1Q8NGR4 320 aa10.96□□□□□ -0.65
CKS1B-202ENST00000368436 THAP6Q8TBB0 222 aa10.96□□□□□ -0.65
CKS1B-202ENST00000368436 FXYD5Q96DB9 178 aa10.96□□□□□ -0.65
CKS1B-202ENST00000368436 PRO0255Q9UI72 69 aa10.96□□□□□ -0.65
CKS1B-202ENST00000368436 NXPH4O95158 308 aa10.95□□□□□ -0.66
CKS1B-202ENST00000368436 ZNF138P52744 262 aa10.95□□□□□ -0.66
CKS1B-202ENST00000368436 CRYBA4P53673 196 aa10.95□□□□□ -0.66
CKS1B-202ENST00000368436 SLAQ13239 276 aa10.95□□□□□ -0.66
CKS1B-202ENST00000368436 FHL2Q14192 279 aa10.95□□□□□ -0.66
CKS1B-202ENST00000368436 MRPL32Q9BYC8 188 aaKnown RBP10.95□□□□□ -0.66
CKS1B-202ENST00000368436 SLC25A31Q9H0C2 315 aa10.95□□□□□ -0.66
CKS1B-202ENST00000368436 MRPL16Q9NX20 251 aaKnown RBP10.95□□□□□ -0.66
CKS1B-202ENST00000368436 E5RGE8 158 aa10.94□□□□□ -0.66
CKS1B-202ENST00000368436 IGHV3-53P01767 116 aa10.94□□□□□ -0.66
CKS1B-202ENST00000368436 MZT2BQ6NZ67 158 aa10.94□□□□□ -0.66
CKS1B-202ENST00000368436 LYPD5Q6UWN5 251 aa10.94□□□□□ -0.66
CKS1B-202ENST00000368436 ARPC5LQ9BPX5 153 aa10.94□□□□□ -0.66
CKS1B-202ENST00000368436 PAXXQ9BUH6 204 aa10.94□□□□□ -0.66
CKS1B-202ENST00000368436 HHLA3Q9XRX5 114 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms