RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 MGAM2Q2M2H8 2515 aa9.05□□□□□ -0.96
USF1-201ENST00000368019 B4DSR2 109 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 K7ERU9 68 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 IGHV1-8P0DP01 117 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 ARF6P62330 175 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 LINC00173Q6ZV60 143 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 C2orf91Q6ZV80 131 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 TMEM133Q9H2Q1 129 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 SIGLEC9Q9Y336 463 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 ARHGAP32A7KAX9 2087 aa9.04□□□□□ -0.96
USF1-201ENST00000368019 MEGF8Q7Z7M0 2845 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 TRBV19A0A075B6N1 114 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 MUC21A0A0G2JKD1 596 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 MUC21A0A140T8X8 626 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 A6NDN8 102 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 H3BRM9 83 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 I3L2K1 104 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 CT45A10P0DMU9 189 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 PSG3Q16557 428 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 OCIAD2Q56VL3 154 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 TMEM97Q5BJF2 176 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 MUC21Q5SSG8 566 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 GTF2H5Q6ZYL4 71 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 OR4X2Q8NGF9 303 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 RPH3ALQ9UNE2 315 aa9.03□□□□□ -0.96
USF1-201ENST00000368019 TEX22C9J3V5 150 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 FCN3O75636 299 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 FGF6P10767 208 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 PSG1P11464 419 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 LMO4P61968 165 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 PSG9Q00887 426 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 HSD52Q0P140 79 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 PLGLAQ15195 96 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 C21orf62-AS1Q17RA5 79 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 SIGLEC15Q6ZMC9 328 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 Q6ZVH6 145 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 PRNTQ86SH4 94 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 PPP1R27Q86WC6 154 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 BOD1L2Q8IYS8 172 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 RASL11BQ9BPW5 248 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 HIF1ANQ9NWT6 349 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 PSG8Q9UQ74 426 aa9.02□□□□□ -0.97
USF1-201ENST00000368019 LINC01546A6NGU7 62 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 OR2T8A6NH00 312 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 ZNF785A8K8V0 405 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 MRPS12O15235 138 aaKnown RBP9.01□□□□□ -0.97
USF1-201ENST00000368019 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 MSMBP08118 114 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 LYZP61626 148 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 UFSP1Q6NVU6 142 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 GOLT1AQ6ZVE7 132 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 ZC2HC1AQ96GY0 325 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 CTSZQ9UBR2 303 aa9.01□□□□□ -0.97
USF1-201ENST00000368019 TNCP24821 2201 aa9□□□□□ -0.97
USF1-201ENST00000368019 C9orf118A6NHY6 69 aa9□□□□□ -0.97
USF1-201ENST00000368019 M0QZ24 198 aa9□□□□□ -0.97
USF1-201ENST00000368019 ARMS2P0C7Q2 107 aa9□□□□□ -0.97
USF1-201ENST00000368019 S100A7P31151 101 aa9□□□□□ -0.97
USF1-201ENST00000368019 CCL8P80075 99 aa9□□□□□ -0.97
USF1-201ENST00000368019 DIAPH2-AS1Q14236 149 aa9□□□□□ -0.97
USF1-201ENST00000368019 FAM104BQ5XKR9 115 aa9□□□□□ -0.97
USF1-201ENST00000368019 HCP5Q6MZN7 132 aa9□□□□□ -0.97
USF1-201ENST00000368019 SRSF12Q8WXF0 261 aaKnown RBP9□□□□□ -0.97
USF1-201ENST00000368019 IGHV1-3A0A0C4DH29 117 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 WI2-2373I1.2A0A1W2PRP0 233 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 TMEM89A2RUT3 159 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 WIPF1O43516 503 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 AVPP01185 164 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 IGKV1-17P01599 117 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 HBDP02042 147 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 HLA-DRB4P13762 266 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 ASPHD1Q5U4P2 390 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 AMMECR1LQ6DCA0 310 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 ORMDL3Q8N138 153 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 OR5A1Q8NGJ0 315 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 SGK494Q96LW2 274 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 HLA-DRB4X5D2U9 266 aa8.99□□□□□ -0.97
USF1-201ENST00000368019 A0A087X0K7 114 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 A0A096LNJ9 63 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 TRAV8-6A0A0B4J262 113 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 GAGE12BA1L429 117 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 C7orf71A4D174 169 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 BUB1B-PAK6H3BSN5 160 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 ENSAO43768 121 aaKnown RBP8.98□□□□□ -0.97
USF1-201ENST00000368019 IGHV3-48P01763 117 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 HILS1P60008 231 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 PAX8Q06710 450 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 LDLRAD2Q5SZI1 272 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 LYPD2Q6UXB3 125 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 ZNF418Q8TF45 676 aaPredicted RBP8.98□□□□□ -0.97
USF1-201ENST00000368019 ZNF414Q96IQ9 312 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 AP1S3Q96PC3 154 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 AAMDCQ9H7C9 122 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
USF1-201ENST00000368019 TRAV8-1A0A0A6YYK1 113 aa8.97□□□□□ -0.97
USF1-201ENST00000368019 TMEM189A5PLL7 270 aa8.97□□□□□ -0.97
USF1-201ENST00000368019 K7EIM0 57 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms