RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 TGIF2-C20orf24A0A0A6YYL0 155 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 C2orf70A6NJV1 201 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 A8MWL6 223 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 NPIPB6E9PJ23 425 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 SOCS3O14543 225 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 P01737 135 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 CBLN1P23435 193 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 RPS10P46783 165 aaKnown RBP10.23□□□□□ -0.77
CCDC197-201ENST00000359253 RPL11P62913 178 aaKnown RBP10.23□□□□□ -0.77
CCDC197-201ENST00000359253 PAFAH1B2P68402 229 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 C12orf54Q6X4T0 127 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 GBGT1Q8N5D6 347 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 KLHL30-AS1Q8NEE0 82 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 LINC00477Q96M19 166 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 PRR25Q96S07 402 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 GFRA4Q9GZZ7 299 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 SAV1Q9H4B6 383 aaPredicted RBP10.23□□□□□ -0.77
CCDC197-201ENST00000359253 RNF114Q9Y508 228 aa10.23□□□□□ -0.77
CCDC197-201ENST00000359253 TRAV2A0A0B4J234 112 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 TRBV7-9A0A0J9YWB2 115 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 A0A1W2PPQ1 181 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 SMIM27A0A1W2PRY6 76 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 KHDC1LQ5JSQ8 128 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 TMEM78Q5T7P6 136 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 NHLRC2Q8NBF2 726 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 TSKUQ8WUA8 353 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 SGK494Q96LW2 274 aa10.22□□□□□ -0.77
CCDC197-201ENST00000359253 RPP21Q9H633 154 aaKnown RBP10.22□□□□□ -0.77
CCDC197-201ENST00000359253 IGKV2-40A0A087WW87 121 aaPredicted RBP10.21□□□□□ -0.77
CCDC197-201ENST00000359253 IGKV2D-40P01614 121 aaPredicted RBP10.21□□□□□ -0.77
CCDC197-201ENST00000359253 ZNF138P52744 262 aa10.21□□□□□ -0.77
CCDC197-201ENST00000359253 PROK1P58294 105 aa10.21□□□□□ -0.77
CCDC197-201ENST00000359253 SMUG1Q53HV7 270 aa10.21□□□□□ -0.77
CCDC197-201ENST00000359253 PRR27Q6MZM9 219 aa10.21□□□□□ -0.77
CCDC197-201ENST00000359253 RASL11AQ6T310 242 aa10.21□□□□□ -0.77
CCDC197-201ENST00000359253 OR9G4Q8NGQ1 327 aa10.21□□□□□ -0.77
CCDC197-201ENST00000359253 ZNF747Q9BV97 191 aa10.21□□□□□ -0.77
CCDC197-201ENST00000359253 NAT8BQ9UHF3 227 aa10.21□□□□□ -0.77
CCDC197-201ENST00000359253 XKRY2A2RUG3 117 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 IZUMO1RA6ND01 250 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 ZNF705FA8MVS1 300 aaPredicted RBP10.2□□□□□ -0.78
CCDC197-201ENST00000359253 HLA-DMBP28068 263 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
CCDC197-201ENST00000359253 FHL3Q13643 280 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 FAM162BQ5T6X4 162 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 C3orf56Q8N813 242 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 ZNF738Q8NE65 137 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 OR10J6PQ8NGY7 276 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 ASCL2Q99929 193 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 SIGLEC8Q9NYZ4 499 aa10.2□□□□□ -0.78
CCDC197-201ENST00000359253 CD28P10747 220 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 FOXA3P55318 350 aaPredicted RBP10.19□□□□□ -0.78
CCDC197-201ENST00000359253 RPS20P60866 119 aaKnown RBP10.19□□□□□ -0.78
CCDC197-201ENST00000359253 Q6AWC8 147 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 IGFL4Q6B9Z1 124 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 WDR73Q6P4I2 378 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 SHISA2Q6UWI4 295 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 RNF182Q8N6D2 247 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 DCANP1Q8TF63 244 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 ZC2HC1AQ96GY0 325 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 VGLL1Q99990 258 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 MS4A6AQ9H2W1 248 aa10.19□□□□□ -0.78
CCDC197-201ENST00000359253 TRAV25A0A0B4J276 109 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 FABP5P3A8MUU1 101 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 PRAC2D3DTV9 90 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 CCL24O00175 119 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 MT-ND6P03923 174 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 SLURP1P55000 103 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 C18orf65Q6ZTR6 163 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 ATP5L2Q7Z4Y8 100 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 AGPAT4-IT1Q9H0P7 198 aa10.18□□□□□ -0.78
CCDC197-201ENST00000359253 K7EQG2 157 aa10.17□□□□□ -0.78
CCDC197-201ENST00000359253 HIST1H1AQ02539 215 aaPredicted RBP10.17□□□□□ -0.78
CCDC197-201ENST00000359253 DEFB136Q30KP8 78 aa10.17□□□□□ -0.78
CCDC197-201ENST00000359253 LINC00322Q6ZN03 302 aaPredicted RBP10.17□□□□□ -0.78
CCDC197-201ENST00000359253 DLX4Q92988 240 aaPredicted RBP10.17□□□□□ -0.78
CCDC197-201ENST00000359253 RAX2Q96IS3 184 aa10.17□□□□□ -0.78
CCDC197-201ENST00000359253 CITED2Q99967 270 aaPredicted RBP10.17□□□□□ -0.78
CCDC197-201ENST00000359253 GNB1LQ9BYB4 327 aa10.17□□□□□ -0.78
CCDC197-201ENST00000359253 HAX1O00165 279 aa10.16□□□□□ -0.78
CCDC197-201ENST00000359253 CSN3P07498 182 aa10.16□□□□□ -0.78
CCDC197-201ENST00000359253 RBPMS2Q6ZRY4 209 aaKnown RBP10.16□□□□□ -0.78
CCDC197-201ENST00000359253 NDUFA11Q86Y39 141 aa10.16□□□□□ -0.78
CCDC197-201ENST00000359253 OR8A1Q8NGG7 326 aa10.16□□□□□ -0.78
CCDC197-201ENST00000359253 OR2D3Q8NGH3 330 aa10.16□□□□□ -0.78
CCDC197-201ENST00000359253 C20orf173Q96LM9 149 aa10.16□□□□□ -0.78
CCDC197-201ENST00000359253 ODF3Q96PU9 254 aa10.16□□□□□ -0.78
CCDC197-201ENST00000359253 A0A1B0GW15 77 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 TMEM189A5PLL7 270 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 TRGC2P03986 189 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 S100A6P06703 90 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 CRIP1P50238 77 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 ERCC8Q13216 396 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 ACTL10Q5JWF8 245 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 DYNLRB2Q8TF09 96 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 C8orf49Q96NF6 230 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 NEU1Q99519 415 aa10.15□□□□□ -0.78
CCDC197-201ENST00000359253 HIGD1CA8MV81 97 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms