RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 C8orf88P0DMB2 117 aa9.88□□□□□ -0.83
GGPS1-202ENST00000358966 OR10J3Q5JRS4 329 aa9.88□□□□□ -0.83
GGPS1-202ENST00000358966 SPATA12Q7Z6I5 190 aa9.88□□□□□ -0.83
GGPS1-202ENST00000358966 SMIM20Q8N5G0 67 aa9.88□□□□□ -0.83
GGPS1-202ENST00000358966 ARL2-SNX15V9GYD0 113 aa9.88□□□□□ -0.83
GGPS1-202ENST00000358966 C9orf118A6NHY6 69 aa9.88□□□□□ -0.83
GGPS1-202ENST00000358966 F8W735 103 aaPredicted RBP9.88□□□□□ -0.83
GGPS1-202ENST00000358966 C5orf56Q8N8D9 126 aa9.88□□□□□ -0.83
GGPS1-202ENST00000358966 SPATA25Q9BR10 227 aa9.88□□□□□ -0.83
GGPS1-202ENST00000358966 hDV102S1A0JD36 115 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 HLA-DRB1P01911 266 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 DEFB113Q30KQ7 82 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 DPF1Q92782 380 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 RNF183Q96D59 192 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 SGK494Q96LW2 274 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 LINC00479Q96M42 142 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 Q96MF0 132 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 TRGV9Q99603 122 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 SERTAD4Q9NUC0 356 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 NAT8BQ9UHF3 227 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 CRYBB3P26998 211 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 BLCAPP62952 87 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 OR10AG1Q8NH19 301 aa9.87□□□□□ -0.83
GGPS1-202ENST00000358966 MRPL16Q9NX20 251 aaKnown RBP9.87□□□□□ -0.83
GGPS1-202ENST00000358966 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.86□□□□□ -0.83
GGPS1-202ENST00000358966 SLC17A3O00476 420 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 LCNL1Q6ZST4 164 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 C1RLQ9NZP8 487 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 NPIPB5A8MRT5 1133 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 SLC25A16P16260 332 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 SRIP30626 198 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 HIST1H1AQ02539 215 aaPredicted RBP9.86□□□□□ -0.83
GGPS1-202ENST00000358966 CIARTQ8N365 385 aaPredicted RBP9.86□□□□□ -0.83
GGPS1-202ENST00000358966 PAXXQ9BUH6 204 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 SPCS1Q9Y6A9 102 aa9.86□□□□□ -0.83
GGPS1-202ENST00000358966 OR4C46A6NHA9 309 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 FBLL1A6NHQ2 334 aaKnown RBP9.85□□□□□ -0.83
GGPS1-202ENST00000358966 SPINK4O60575 86 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 IL4P05112 153 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 UBE2G1P62253 170 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 TTC9CQ8N5M4 171 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 NHLRC2Q8NBF2 726 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 OR10G8Q8NGN5 311 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 J3QKU1 62 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 RPL32P62910 135 aaKnown RBP9.85□□□□□ -0.83
GGPS1-202ENST00000358966 GNG5P63218 68 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 FOXE3Q13461 319 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 C15orf32Q32M92 178 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 PQLC2Q6ZP29 291 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 LINC01356Q8N9X3 169 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 OR5A1Q8NGJ0 315 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 FXYD5Q96DB9 178 aa9.85□□□□□ -0.83
GGPS1-202ENST00000358966 A0A0G2JLM5 398 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 GPR183P32249 361 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 ARL3P36405 182 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 TAS2R45P59539 299 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 MRPL54Q6P161 138 aaKnown RBP9.84□□□□□ -0.83
GGPS1-202ENST00000358966 KRTAP1-3Q8IUG1 177 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 WFDC11Q8NEX6 87 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 OR1L4Q8NGR5 311 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 IGHV4-59P01825 116 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 DEFB112Q30KQ8 113 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 IL17RELQ6ZVW7 336 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 DUX5Q96PT3 197 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 SRSF8Q9BRL6 282 aaKnown RBP9.84□□□□□ -0.83
GGPS1-202ENST00000358966 C21orf62Q9NYP8 219 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 MOB4Q9Y3A3 225 aa9.84□□□□□ -0.83
GGPS1-202ENST00000358966 B5MCH6 92 aa9.84□□□□□ -0.84
GGPS1-202ENST00000358966 H0Y8G0 127 aa9.84□□□□□ -0.84
GGPS1-202ENST00000358966 DSCR9P59020 149 aa9.84□□□□□ -0.84
GGPS1-202ENST00000358966 ATP5G2Q06055 141 aa9.84□□□□□ -0.84
GGPS1-202ENST00000358966 C17orf77Q96MU5 243 aa9.84□□□□□ -0.84
GGPS1-202ENST00000358966 GNB1LQ9BYB4 327 aa9.84□□□□□ -0.84
GGPS1-202ENST00000358966 MRPL32Q9BYC8 188 aaKnown RBP9.84□□□□□ -0.84
GGPS1-202ENST00000358966 SLC25A39Q9BZJ4 359 aaPredicted RBP9.84□□□□□ -0.84
GGPS1-202ENST00000358966 C2orf70A6NJV1 201 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 H3BRM9 83 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 IGHV4-31P0DP07 118 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 SEC11AP67812 179 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 Q71RC1 249 aaPredicted RBP9.83□□□□□ -0.84
GGPS1-202ENST00000358966 TMEM167BQ9NRX6 74 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 M0R2Z0 102 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 SMAD7O15105 426 aaKnown RBP9.83□□□□□ -0.84
GGPS1-202ENST00000358966 ZNF491Q8N8L2 437 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 OCC1Q8TAD7 63 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 PSMG3-AS1Q96PY0 264 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 ASCL2Q99929 193 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 HIGD1AQ9Y241 93 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 UFC1Q9Y3C8 167 aa9.83□□□□□ -0.84
GGPS1-202ENST00000358966 TRAV9-1A0A075B6T8 112 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 IGHV3OR16-13A0A075B7E8 117 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 IGHV3-74A0A0B4J1X5 117 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 K7EN84 100 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 PRR31Q5SQ13 230 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 RNF125Q96EQ8 232 aa9.82□□□□□ -0.84
GGPS1-202ENST00000358966 TRBV9A0A0B4J1U6 114 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms