RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CCDC168Q8NDH2 2452 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 TRGV4A0A0C4DH28 118 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 PRSS46E5RG02 174 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 SSBP2P81877 361 aaPredicted RBP10.95□□□□□ -0.66
VCP-201ENST00000358901 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 COL4A3Q01955 1670 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 C3orf36Q3SXR2 165 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 MRPL51Q4U2R6 128 aaKnown RBP10.95□□□□□ -0.66
VCP-201ENST00000358901 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
VCP-201ENST00000358901 GTSF1LQ9H1H1 148 aa10.95□□□□□ -0.66
VCP-201ENST00000358901 GNLYP22749 145 aa10.94□□□□□ -0.66
VCP-201ENST00000358901 IL17RELQ6ZVW7 336 aa10.94□□□□□ -0.66
VCP-201ENST00000358901 PIP4P2Q8N4L2 257 aa10.94□□□□□ -0.66
VCP-201ENST00000358901 LCNL1Q6ZST4 164 aa10.94□□□□□ -0.66
VCP-201ENST00000358901 ZC2HC1AQ96GY0 325 aa10.94□□□□□ -0.66
VCP-201ENST00000358901 YAE1D1Q9NRH1 226 aa10.94□□□□□ -0.66
VCP-201ENST00000358901 SPOCK3Q9BQ16 436 aa10.94□□□□□ -0.66
VCP-201ENST00000358901 CHCHD5Q9BSY4 110 aa10.94□□□□□ -0.66
VCP-201ENST00000358901 TEX43Q6ZNM6 134 aa10.93□□□□□ -0.66
VCP-201ENST00000358901 DAZ1Q9NQZ3 744 aaKnown RBP10.93□□□□□ -0.66
VCP-201ENST00000358901 M0R2P5 195 aa10.93□□□□□ -0.66
VCP-201ENST00000358901 PLA2G2CQ5R387 149 aa10.93□□□□□ -0.66
VCP-201ENST00000358901 FAM110DQ8TAY7 271 aaPredicted RBP10.93□□□□□ -0.66
VCP-201ENST00000358901 ESDP10768 282 aa10.93□□□□□ -0.66
VCP-201ENST00000358901 MAJINQ3KP22 176 aa10.93□□□□□ -0.66
VCP-201ENST00000358901 RUSC1-AS1Q66K80 236 aa10.93□□□□□ -0.66
VCP-201ENST00000358901 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
VCP-201ENST00000358901 DLX4Q92988 240 aaPredicted RBP10.93□□□□□ -0.66
VCP-201ENST00000358901 PCNX3Q9H6A9 2034 aa10.93□□□□□ -0.66
VCP-201ENST00000358901 UBE2E1P51965 193 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 PLEKHB2Q96CS7 222 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 SIGLEC8Q9NYZ4 499 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 NACAE9PAV3 2078 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 FAM223BA6NKX1 122 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 FAM223AQ8IWN6 122 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 TMEM14CQ9P0S9 112 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 H3BRN7 92 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 NUPR1O60356 82 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 SPRNQ5BIV9 151 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 C17orf77Q96MU5 243 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 PCDH15Q96QU1 1955 aa10.92□□□□□ -0.66
VCP-201ENST00000358901 CFAP161Q6P656 301 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 OTOGLQ3ZCN5 2332 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 TECTAO75443 2155 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
VCP-201ENST00000358901 IGLC7A0M8Q6 106 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 ADARB2-AS1A8MUL3 147 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 NPYP01303 97 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 WT1P19544 449 aaPredicted RBP10.91□□□□□ -0.66
VCP-201ENST00000358901 SYNJ2BPP57105 145 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 KRTAP27-1Q3LI81 207 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 SORL1Q92673 2214 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 KIAA1671Q9BY89 1806 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 TRGV1A0A0A0MS02 117 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 RBMY1BA6NDE4 496 aaKnown RBP10.91□□□□□ -0.66
VCP-201ENST00000358901 RBMY1EA6NEQ0 496 aaKnown RBP10.91□□□□□ -0.66
VCP-201ENST00000358901 IGHV3-53P01767 116 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 RBMY1DP0C7P1 496 aaKnown RBP10.91□□□□□ -0.66
VCP-201ENST00000358901 RBMY1A1P0DJD3 496 aaKnown RBP10.91□□□□□ -0.66
VCP-201ENST00000358901 RBMY1CP0DJD4 496 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 MORN3Q6PF18 240 aaPredicted RBP10.91□□□□□ -0.66
VCP-201ENST00000358901 ZNF491Q8N8L2 437 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 C1orf159Q96HA4 380 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 ANAPC13Q9BS18 74 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 CTSZQ9UBR2 303 aa10.91□□□□□ -0.66
VCP-201ENST00000358901 OCIAD2Q56VL3 154 aa10.9□□□□□ -0.66
VCP-201ENST00000358901 SPXQ9BT56 116 aa10.9□□□□□ -0.66
VCP-201ENST00000358901 PIEZO1Q92508 2521 aa10.9□□□□□ -0.66
VCP-201ENST00000358901 TRAV26-2A0A0B4J265 109 aa10.9□□□□□ -0.66
VCP-201ENST00000358901 ADAMTSL5Q6ZMM2 481 aa10.9□□□□□ -0.66
VCP-201ENST00000358901 C8orf86Q6ZUL3 223 aa10.9□□□□□ -0.66
VCP-201ENST00000358901 VGLL1Q99990 258 aa10.9□□□□□ -0.66
VCP-201ENST00000358901 TLN1Q9Y490 2541 aaKnown RBP10.9□□□□□ -0.66
VCP-201ENST00000358901 K7ENP7 123 aa10.9□□□□□ -0.67
VCP-201ENST00000358901 COX8AP10176 69 aa10.9□□□□□ -0.67
VCP-201ENST00000358901 LINC00158P58513 81 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
VCP-201ENST00000358901 MED12LQ86YW9 2145 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
VCP-201ENST00000358901 KAAG1Q9UBP8 84 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 UBE2E2Q96LR5 201 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 KNCNA6PVL3 124 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 Q8N8P6 123 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 PHLDA1Q8WV24 401 aaPredicted RBP10.89□□□□□ -0.67
VCP-201ENST00000358901 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 TP53TG1Q9Y2A0 90 aa10.89□□□□□ -0.67
VCP-201ENST00000358901 K7EM74 188 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 CKS1BP61024 79 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 ATXN8Q156A1 80 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 C22orf46C9J442 243 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 LGALS9BQ3B8N2 356 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 TDRG1Q3Y452 100 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 MORN5Q5VZ52 161 aa10.88□□□□□ -0.67
VCP-201ENST00000358901 LGALS9CQ6DKI2 356 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms