RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 Q9H3A6 140 aa12.14□□□□□ -0.47
FAM3D-201ENST00000358781 KMT2AQ03164 3969 aa12.14□□□□□ -0.47
FAM3D-201ENST00000358781 BORCS7-ASMTA0A0B4J1R7 106 aa12.13□□□□□ -0.47
FAM3D-201ENST00000358781 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
FAM3D-201ENST00000358781 J3KRW8 73 aa12.13□□□□□ -0.47
FAM3D-201ENST00000358781 SERF2P84101 59 aa12.13□□□□□ -0.47
FAM3D-201ENST00000358781 VGLL1Q99990 258 aa12.13□□□□□ -0.47
FAM3D-201ENST00000358781 PLA2G2EQ9NZK7 142 aa12.13□□□□□ -0.47
FAM3D-201ENST00000358781 MBP02144 154 aa12.12□□□□□ -0.47
FAM3D-201ENST00000358781 SLC25A5P05141 298 aaKnown RBP12.12□□□□□ -0.47
FAM3D-201ENST00000358781 HTN1P15515 57 aa12.12□□□□□ -0.47
FAM3D-201ENST00000358781 CSN1S1P47710 185 aa12.12□□□□□ -0.47
FAM3D-201ENST00000358781 CDC34P49427 236 aaPredicted RBP12.12□□□□□ -0.47
FAM3D-201ENST00000358781 TMEM78Q5T7P6 136 aa12.12□□□□□ -0.47
FAM3D-201ENST00000358781 GNPNAT1Q96EK6 184 aaPredicted RBP12.12□□□□□ -0.47
FAM3D-201ENST00000358781 APLNQ9ULZ1 77 aa12.12□□□□□ -0.47
FAM3D-201ENST00000358781 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 TRAV12-3A0A0B4J271 114 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 LYRM9A8MSI8 78 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 KLLNB2CW77 178 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 SMLR1H3BR10 107 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 HMGB3O15347 200 aaKnown RBP12.11□□□□□ -0.47
FAM3D-201ENST00000358781 ARPC5O15511 151 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 DAD1P61803 113 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 RAB24Q969Q5 203 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 C16orf74Q96GX8 76 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 OTORQ9NRC9 128 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 DNAH6Q9C0G6 4158 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 C7orf71A4D174 169 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 RBAKDNA6NC62 111 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 NMBP08949 121 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 STAG3L2P0CL84 134 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 STAG3L3P0CL85 134 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 ARL14EPLP0DKL9 152 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 CRISP2P16562 243 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 LGALS9CQ6DKI2 356 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 RNASE8Q8TDE3 154 aaKnown RBP12.11□□□□□ -0.47
FAM3D-201ENST00000358781 RXFP4Q8TDU9 374 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
FAM3D-201ENST00000358781 ZNF492Q9P255 531 aa12.11□□□□□ -0.47
FAM3D-201ENST00000358781 TAAR5O14804 337 aa12.1□□□□□ -0.47
FAM3D-201ENST00000358781 ZNF138P52744 262 aa12.1□□□□□ -0.47
FAM3D-201ENST00000358781 PGPA6NDG6 321 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 DIRC3C9JPN6 131 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 ZNF324O75467 553 aaPredicted RBP12.09□□□□□ -0.47
FAM3D-201ENST00000358781 RNASE4P34096 147 aaKnown RBP12.09□□□□□ -0.47
FAM3D-201ENST00000358781 CD300CQ08708 224 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 BTN1A1Q13410 526 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 FAM74A1Q5RGS3 127 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 CCDC28AQ8IWP9 274 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 ZFAND2AQ8N6M9 145 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 HYLS1Q96M11 299 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 PYGO2Q9BRQ0 406 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 ACTR3CQ9C0K3 210 aaPredicted RBP12.09□□□□□ -0.47
FAM3D-201ENST00000358781 CYTL1Q9NRR1 136 aa12.09□□□□□ -0.47
FAM3D-201ENST00000358781 TIMM8BQ9Y5J9 83 aaPredicted RBP12.09□□□□□ -0.47
FAM3D-201ENST00000358781 TRBV7-9A0A0J9YWB2 115 aa12.08□□□□□ -0.48
FAM3D-201ENST00000358781 GPX1P07203 203 aa12.08□□□□□ -0.48
FAM3D-201ENST00000358781 HTN3P15516 51 aa12.08□□□□□ -0.48
FAM3D-201ENST00000358781 GCHFRP30047 84 aa12.08□□□□□ -0.48
FAM3D-201ENST00000358781 Q8TAT8 98 aa12.08□□□□□ -0.48
FAM3D-201ENST00000358781 CMTM2Q8TAZ6 248 aa12.08□□□□□ -0.48
FAM3D-201ENST00000358781 SUN5Q8TC36 379 aa12.08□□□□□ -0.48
FAM3D-201ENST00000358781 DEFB130BP0DP73 79 aa12.07□□□□□ -0.48
FAM3D-201ENST00000358781 DEFB130AP0DP74 79 aa12.07□□□□□ -0.48
FAM3D-201ENST00000358781 ZNF345Q14585 488 aa12.07□□□□□ -0.48
FAM3D-201ENST00000358781 PRR9Q5T870 116 aa12.07□□□□□ -0.48
FAM3D-201ENST00000358781 ARL6IP6Q8N6S5 226 aa12.07□□□□□ -0.48
FAM3D-201ENST00000358781 FAM210BQ96KR6 192 aa12.07□□□□□ -0.48
FAM3D-201ENST00000358781 LINC00467Q9BRT7 94 aa12.07□□□□□ -0.48
FAM3D-201ENST00000358781 NDUFAF3Q9BU61 184 aa12.07□□□□□ -0.48
FAM3D-201ENST00000358781 NOP10Q9NPE3 64 aaKnown RBP12.07□□□□□ -0.48
FAM3D-201ENST00000358781 HMSDA8MTL9 139 aa12.06□□□□□ -0.48
FAM3D-201ENST00000358781 CXorf1O96002 111 aa12.06□□□□□ -0.48
FAM3D-201ENST00000358781 SSX7Q7RTT5 188 aa12.06□□□□□ -0.48
FAM3D-201ENST00000358781 KCNRGQ8N5I3 272 aa12.06□□□□□ -0.48
FAM3D-201ENST00000358781 OR11H4Q8NGC9 324 aa12.06□□□□□ -0.48
FAM3D-201ENST00000358781 RPH3ALQ9UNE2 315 aa12.06□□□□□ -0.48
FAM3D-201ENST00000358781 ZNF726P1Q15940 193 aa12.05□□□□□ -0.48
FAM3D-201ENST00000358781 GOLT1AQ6ZVE7 132 aa12.05□□□□□ -0.48
FAM3D-201ENST00000358781 TMED6Q8WW62 240 aa12.05□□□□□ -0.48
FAM3D-201ENST00000358781 ARPC5LQ9BPX5 153 aa12.05□□□□□ -0.48
FAM3D-201ENST00000358781 TMEM167BQ9NRX6 74 aa12.05□□□□□ -0.48
FAM3D-201ENST00000358781 LENEPQ9Y5L5 61 aa12.05□□□□□ -0.48
FAM3D-201ENST00000358781 CBY3A6NI87 242 aa12.04□□□□□ -0.48
FAM3D-201ENST00000358781 SNURFLB1AK76 121 aa12.04□□□□□ -0.48
FAM3D-201ENST00000358781 AKR1C8PQ5T2L2 129 aa12.04□□□□□ -0.48
FAM3D-201ENST00000358781 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
FAM3D-201ENST00000358781 CTXND1A0A1B0GTU2 59 aa12.03□□□□□ -0.48
FAM3D-201ENST00000358781 GNG5P63218 68 aa12.03□□□□□ -0.48
FAM3D-201ENST00000358781 ANXA2RQ3ZCQ2 193 aa12.03□□□□□ -0.48
FAM3D-201ENST00000358781 Q6ZQT7 251 aa12.03□□□□□ -0.48
FAM3D-201ENST00000358781 EIF4E3Q8N5X7 224 aaKnown RBP12.03□□□□□ -0.48
FAM3D-201ENST00000358781 LINC00612Q8N6U2 182 aa12.03□□□□□ -0.48
FAM3D-201ENST00000358781 ZNF680Q8NEM1 530 aa12.03□□□□□ -0.48
FAM3D-201ENST00000358781 A0A0D9SG52 128 aa12.02□□□□□ -0.49
FAM3D-201ENST00000358781 RGS13O14921 159 aa12.02□□□□□ -0.49
FAM3D-201ENST00000358781 DAZ2Q13117 558 aaKnown RBP12.02□□□□□ -0.49
FAM3D-201ENST00000358781 TMEM88Q6PEY1 159 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms