RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 C9JQL5 133 aa18.65■□□□□ 0.58
SSBP3-202ENST00000357475 HIST1H2BAQ96A08 127 aa18.65■□□□□ 0.58
SSBP3-202ENST00000357475 RBAKDNA6NC62 111 aa18.64■□□□□ 0.58
SSBP3-202ENST00000357475 DUSP14O95147 198 aaKnown RBP18.64■□□□□ 0.58
SSBP3-202ENST00000357475 LINC00322Q6ZN03 302 aaPredicted RBP18.64■□□□□ 0.58
SSBP3-202ENST00000357475 C2CD4CQ8TF44 421 aa18.64■□□□□ 0.58
SSBP3-202ENST00000357475 DERL1Q9BUN8 251 aa18.64■□□□□ 0.58
SSBP3-202ENST00000357475 TAGLN2P37802 199 aaKnown RBP18.64■□□□□ 0.57
SSBP3-202ENST00000357475 C11orf52Q96A22 123 aa18.64■□□□□ 0.57
SSBP3-202ENST00000357475 TXNDC17Q9BRA2 123 aa18.64■□□□□ 0.57
SSBP3-202ENST00000357475 FRMD6-AS1P0C7T7 363 aa18.63■□□□□ 0.57
SSBP3-202ENST00000357475 KIR3DS1Q14943 382 aa18.63■□□□□ 0.57
SSBP3-202ENST00000357475 TVP23CQ96ET8 276 aa18.63■□□□□ 0.57
SSBP3-202ENST00000357475 TCEAL7Q9BRU2 100 aa18.63■□□□□ 0.57
SSBP3-202ENST00000357475 A8MZ25 164 aa18.62■□□□□ 0.57
SSBP3-202ENST00000357475 M0R2Z0 102 aa18.62■□□□□ 0.57
SSBP3-202ENST00000357475 DEFA6Q01524 100 aa18.62■□□□□ 0.57
SSBP3-202ENST00000357475 TMEM78Q5T7P6 136 aa18.62■□□□□ 0.57
SSBP3-202ENST00000357475 ZNF492Q9P255 531 aa18.62■□□□□ 0.57
SSBP3-202ENST00000357475 LOC102724200A0A096LPH7 203 aaPredicted RBP18.61■□□□□ 0.57
SSBP3-202ENST00000357475 PDE6DO43924 150 aa18.61■□□□□ 0.57
SSBP3-202ENST00000357475 GIG44P09565 113 aaPredicted RBP18.61■□□□□ 0.57
SSBP3-202ENST00000357475 AKR1C3P42330 323 aa18.61■□□□□ 0.57
SSBP3-202ENST00000357475 SPINK13Q1W4C9 94 aa18.61■□□□□ 0.57
SSBP3-202ENST00000357475 DEFB121Q5J5C9 76 aa18.61■□□□□ 0.57
SSBP3-202ENST00000357475 TMEM75Q8N9X5 138 aa18.61■□□□□ 0.57
SSBP3-202ENST00000357475 PSG8Q9UQ74 426 aa18.61■□□□□ 0.57
SSBP3-202ENST00000357475 SERTM2A0A1B0GWG4 89 aa18.6■□□□□ 0.57
SSBP3-202ENST00000357475 F6UZH7 168 aa18.6■□□□□ 0.57
SSBP3-202ENST00000357475 SRP19P09132 144 aaKnown RBP18.6■□□□□ 0.57
SSBP3-202ENST00000357475 ZNF138P52744 262 aa18.6■□□□□ 0.57
SSBP3-202ENST00000357475 PRNTQ86SH4 94 aa18.6■□□□□ 0.57
SSBP3-202ENST00000357475 FAM19A4Q96LR4 140 aa18.6■□□□□ 0.57
SSBP3-202ENST00000357475 LINC00477Q96M19 166 aa18.6■□□□□ 0.57
SSBP3-202ENST00000357475 CLUHP3Q96NS8 147 aa18.6■□□□□ 0.57
SSBP3-202ENST00000357475 MED9Q9NWA0 146 aa18.6■□□□□ 0.57
SSBP3-202ENST00000357475 J3KRW8 73 aa18.59■□□□□ 0.57
SSBP3-202ENST00000357475 FLI1Q01543 452 aaPredicted RBP18.59■□□□□ 0.57
SSBP3-202ENST00000357475 KLF12Q9Y4X4 402 aa18.59■□□□□ 0.57
SSBP3-202ENST00000357475 K7EQM0 130 aa18.59■□□□□ 0.57
SSBP3-202ENST00000357475 Q86TA4 180 aa18.59■□□□□ 0.57
SSBP3-202ENST00000357475 MRAPQ8TCY5 172 aa18.59■□□□□ 0.57
SSBP3-202ENST00000357475 PRKDCP78527 4128 aaKnown RBP18.58■□□□□ 0.56
SSBP3-202ENST00000357475 TRAV12-2A0A075B6T6 113 aa18.58■□□□□ 0.56
SSBP3-202ENST00000357475 RPL35P42766 123 aaKnown RBP18.58■□□□□ 0.56
SSBP3-202ENST00000357475 CEBPGP53567 150 aa18.58■□□□□ 0.56
SSBP3-202ENST00000357475 TMEM183BQ1AE95 376 aa18.58■□□□□ 0.56
SSBP3-202ENST00000357475 PRR9Q5T870 116 aa18.58■□□□□ 0.56
SSBP3-202ENST00000357475 RAB19A4D1S5 217 aa18.57■□□□□ 0.56
SSBP3-202ENST00000357475 LINC00862A6NCI5 91 aa18.57■□□□□ 0.56
SSBP3-202ENST00000357475 COMMD7Q86VX2 200 aa18.57■□□□□ 0.56
SSBP3-202ENST00000357475 C8orf49Q96NF6 230 aa18.57■□□□□ 0.56
SSBP3-202ENST00000357475 PPP1R14DQ9NXH3 145 aa18.57■□□□□ 0.56
SSBP3-202ENST00000357475 XCL2Q9UBD3 114 aa18.57■□□□□ 0.56
SSBP3-202ENST00000357475 CRXO43186 299 aaPredicted RBP18.56■□□□□ 0.56
SSBP3-202ENST00000357475 UBE2G1P62253 170 aa18.56■□□□□ 0.56
SSBP3-202ENST00000357475 PEA15Q15121 130 aa18.56■□□□□ 0.56
SSBP3-202ENST00000357475 ZFAND2AQ8N6M9 145 aa18.56■□□□□ 0.56
SSBP3-202ENST00000357475 FMC1Q96HJ9 113 aa18.56■□□□□ 0.56
SSBP3-202ENST00000357475 CSTL1Q9H114 145 aa18.56■□□□□ 0.56
SSBP3-202ENST00000357475 Q6ZQT7 251 aa18.55■□□□□ 0.56
SSBP3-202ENST00000357475 ODF3Q96PU9 254 aa18.55■□□□□ 0.56
SSBP3-202ENST00000357475 TRBV20OR9-2A0A075B6H5 130 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 TMEM250H0YL14 139 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 CA1P00915 261 aaPredicted RBP18.54■□□□□ 0.56
SSBP3-202ENST00000357475 NHLRC2Q8NBF2 726 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 IGF2BP2-AS1Q96M15 143 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 TREM1Q9NP99 234 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 DNAH9Q9NYC9 4486 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 RBMY1A1P0DJD3 496 aaKnown RBP18.54■□□□□ 0.56
SSBP3-202ENST00000357475 RBMY1CP0DJD4 496 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 CRISP2P16562 243 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 RBMY1FQ15415 496 aaKnown RBP18.54■□□□□ 0.56
SSBP3-202ENST00000357475 ZNF674Q2M3X9 581 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 MORN3Q6PF18 240 aaPredicted RBP18.54■□□□□ 0.56
SSBP3-202ENST00000357475 PARLQ9H300 379 aa18.54■□□□□ 0.56
SSBP3-202ENST00000357475 NBEAL2Q6ZNJ1 2754 aa18.53■□□□□ 0.56
SSBP3-202ENST00000357475 LTAP01374 205 aa18.53■□□□□ 0.56
SSBP3-202ENST00000357475 LEPP41159 167 aa18.53■□□□□ 0.56
SSBP3-202ENST00000357475 CDKN1BP46527 198 aa18.53■□□□□ 0.56
SSBP3-202ENST00000357475 BTN1A1Q13410 526 aa18.53■□□□□ 0.56
SSBP3-202ENST00000357475 KIR2DL5BA0A0G2JN68 375 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 KIR2DL5BA0A0G2JPC4 375 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 TRBV6-1A0A0K0K1D8 114 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 PGPEP1LA6NFU8 196 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 KLLNB2CW77 178 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 CENPWQ5EE01 88 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 GFI1BQ5VTD9 330 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 SBSPONQ8IVN8 264 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 KIR2DL5AQ8N109 375 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 KIR2DL5BQ8NHK3 375 aa18.52■□□□□ 0.56
SSBP3-202ENST00000357475 APOC4P55056 127 aa18.51■□□□□ 0.55
SSBP3-202ENST00000357475 NUTF2P61970 127 aaKnown RBP18.51■□□□□ 0.55
SSBP3-202ENST00000357475 FBLL1A6NHQ2 334 aaKnown RBP18.5■□□□□ 0.55
SSBP3-202ENST00000357475 NDUFS6O75380 124 aaKnown RBP18.5■□□□□ 0.55
SSBP3-202ENST00000357475 RNASE4P34096 147 aaKnown RBP18.5■□□□□ 0.55
SSBP3-202ENST00000357475 ZNF80P51504 273 aaPredicted RBP18.5■□□□□ 0.55
SSBP3-202ENST00000357475 CSNK1G2-AS1Q8NCQ2 148 aa18.5■□□□□ 0.55
SSBP3-202ENST00000357475 LENEPQ9Y5L5 61 aa18.5■□□□□ 0.55
SSBP3-202ENST00000357475 DEFB135Q30KP9 77 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms