RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 LHBP01229 141 aa6□□□□□ -1.45
CCR9-201ENST00000355983 ANXA2RQ3ZCQ2 193 aa6□□□□□ -1.45
CCR9-201ENST00000355983 PAPPA-AS1Q5QFB9 102 aa6□□□□□ -1.45
CCR9-201ENST00000355983 Q71RC1 249 aaPredicted RBP6□□□□□ -1.45
CCR9-201ENST00000355983 NEXN-AS1Q8NBZ9 246 aa6□□□□□ -1.45
CCR9-201ENST00000355983 ZNF296Q8WUU4 475 aaPredicted RBP6□□□□□ -1.45
CCR9-201ENST00000355983 TIMD4Q96H15 378 aa6□□□□□ -1.45
CCR9-201ENST00000355983 E7EUB6 86 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 TIMM23O14925 209 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 IGLV2-23P01705 113 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 CFC1BP0CG36 223 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 CFC1P0CG37 223 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 SRSF9Q13242 221 aaKnown RBP eCLIP5.99□□□□□ -1.45
CCR9-201ENST00000355983 UTF1Q5T230 341 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 C1orf210Q8IVY1 113 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 TDHQ8IZJ6 230 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 ONECUT1Q9UBC0 465 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 A0A0B4J2C4 111 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 TRBV10-2A0A0K0K1G8 114 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 PINLYPA6NC86 204 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 ZNF815PA8K554 130 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 TIMM8AO60220 97 aaPredicted RBP5.99□□□□□ -1.45
CCR9-201ENST00000355983 NDUFA3O95167 84 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 IGFBP4P22692 258 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 HOXA4Q00056 320 aaPredicted RBP5.99□□□□□ -1.45
CCR9-201ENST00000355983 ATXN8Q156A1 80 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 VMA21Q3ZAQ7 101 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 ORMDL2Q53FV1 153 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 TOMM6Q96B49 74 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 C8orf49Q96NF6 230 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 SRSF8Q9BRL6 282 aaKnown RBP5.99□□□□□ -1.45
CCR9-201ENST00000355983 PRADC1Q9BSG0 188 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 C21orf62Q9NYP8 219 aa5.99□□□□□ -1.45
CCR9-201ENST00000355983 KNL1Q8NG31 2342 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 A0A0J9YY99 117 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 H3BVH4 76 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 NDUFA7O95182 113 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 TGFAP01135 160 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 IGKV3-15P01624 115 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 IGHV3-30P01768 117 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 IGHV3-30-5P0DP03 117 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 EBI3Q14213 229 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 C6orf15Q6UXA7 325 aaPredicted RBP5.98□□□□□ -1.45
CCR9-201ENST00000355983 Q6ZQT7 251 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 ZNF575Q86XF7 245 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 C3orf22Q8N5N4 141 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 NRACQ8N912 160 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 AKIRIN1Q9H9L7 192 aaPredicted RBP5.98□□□□□ -1.45
CCR9-201ENST00000355983 DKK4Q9UBT3 224 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 ASCC3Q8N3C0 2202 aaKnown RBP5.98□□□□□ -1.45
CCR9-201ENST00000355983 LAMA2P24043 3122 aaKnown RBP5.98□□□□□ -1.45
CCR9-201ENST00000355983 IGHV4-4A0A075B6R2 117 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 IGHV3-64DA0A0J9YX35 117 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 C9JAW5 83 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 H3BT86 120 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 H3BTX0 84 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 UQCRQO14949 82 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 IGHV3-13P01766 116 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 EGR2P11161 476 aaPredicted RBP5.98□□□□□ -1.45
CCR9-201ENST00000355983 FOXC1Q12948 553 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 LINC00311Q8N616 119 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 SLC25A29Q8N8R3 303 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 OR13C6PQ8NH95 151 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 LEAP2Q969E1 77 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 LINC00526Q96FQ7 95 aa5.98□□□□□ -1.45
CCR9-201ENST00000355983 ACYP1P07311 99 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 FOLR3P41439 243 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 TNFAIP6P98066 277 aaPredicted RBP5.97□□□□□ -1.45
CCR9-201ENST00000355983 LINC01620Q4KN68 170 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 TMEM170BQ5T4T1 132 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 HES3Q5TGS1 186 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 TEX36Q5VZQ5 186 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 SCGB1D4Q6XE38 83 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 DTX2Q86UW9 622 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 C1orf162Q8NEQ5 155 aaPredicted RBP5.97□□□□□ -1.45
CCR9-201ENST00000355983 TMEM101Q96IK0 257 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 H3BMM0 161 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 SCGB2A1O75556 95 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 GATA4P43694 442 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 HERVK_113P61574 105 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 LYZP61626 148 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 MRGPRG-AS1Q2M3A8 158 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 TMEM219Q86XT9 240 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 NTN5Q8WTR8 489 aaPredicted RBP5.97□□□□□ -1.45
CCR9-201ENST00000355983 UBE2WQ96B02 151 aa5.97□□□□□ -1.45
CCR9-201ENST00000355983 IGHV3-33P01772 117 aa5.96□□□□□ -1.45
CCR9-201ENST00000355983 LINC00694P0DN24 101 aa5.96□□□□□ -1.45
CCR9-201ENST00000355983 ERCC8Q13216 396 aa5.96□□□□□ -1.45
CCR9-201ENST00000355983 ZNRF1Q8ND25 227 aa5.96□□□□□ -1.45
CCR9-201ENST00000355983 ZNRF2Q8NHG8 242 aa5.96□□□□□ -1.45
CCR9-201ENST00000355983 SDK2Q58EX2 2172 aa5.96□□□□□ -1.45
CCR9-201ENST00000355983 CNTRLQ7Z7A1 2325 aa5.96□□□□□ -1.46
CCR9-201ENST00000355983 TMSB15BA0A087X1C1 80 aa5.96□□□□□ -1.46
CCR9-201ENST00000355983 TRBV30A0A0K0K1B3 111 aa5.96□□□□□ -1.46
CCR9-201ENST00000355983 NPFFO15130 113 aa5.96□□□□□ -1.46
CCR9-201ENST00000355983 FAM201AQ5SY85 155 aa5.96□□□□□ -1.46
CCR9-201ENST00000355983 POM121L12Q8N7R1 296 aa5.96□□□□□ -1.46
CCR9-201ENST00000355983 PLEKHB2Q96CS7 222 aa5.96□□□□□ -1.46
CCR9-201ENST00000355983 LAMA3Q16787 3333 aa5.95□□□□□ -1.46
CCR9-201ENST00000355983 RAI1Q7Z5J4 1906 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms