RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PCP2Q8IVA1 136 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 Q8TCH9 128 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 B9A039 149 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 C9JAW5 83 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 K7EP34 96 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 TIMM23O14925 209 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 PPP1R27Q86WC6 154 aa11.31□□□□□ -0.6
SREBF1-202ENST00000355815 DLX4Q92988 240 aaPredicted RBP11.31□□□□□ -0.6
SREBF1-202ENST00000355815 B5MCH6 92 aa11.3□□□□□ -0.6
SREBF1-202ENST00000355815 H0YJW9 148 aa11.3□□□□□ -0.6
SREBF1-202ENST00000355815 SS18L2Q9UHA2 77 aa11.3□□□□□ -0.6
SREBF1-202ENST00000355815 E7EQL1 145 aa11.3□□□□□ -0.6
SREBF1-202ENST00000355815 DNAL4O96015 105 aa11.3□□□□□ -0.6
SREBF1-202ENST00000355815 GRNP28799 593 aaKnown RBP11.3□□□□□ -0.6
SREBF1-202ENST00000355815 C11orf1Q9H5F2 150 aa11.3□□□□□ -0.6
SREBF1-202ENST00000355815 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
SREBF1-202ENST00000355815 RNASE2P10153 161 aaKnown RBP11.29□□□□□ -0.6
SREBF1-202ENST00000355815 COX8AP10176 69 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 SSBP2P81877 361 aaPredicted RBP11.29□□□□□ -0.6
SREBF1-202ENST00000355815 A0A1W2PPM0 123 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 DEFB125Q8N687 156 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 TMEM262E9PQX1 116 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 PPP1R17O96001 155 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 TNRC6AQ8NDV7 1962 aaKnown RBP11.29□□□□□ -0.6
SREBF1-202ENST00000355815 TRBV20-1A0A075B6N2 111 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 TRAV8-4A0A0B4J246 113 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 IGHV1-8P0DP01 117 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 RASL11AQ6T310 242 aa11.29□□□□□ -0.6
SREBF1-202ENST00000355815 TMEM8BA6NDV4 472 aa11.28□□□□□ -0.6
SREBF1-202ENST00000355815 CLEC19AQ6UXS0 136 aa11.28□□□□□ -0.6
SREBF1-202ENST00000355815 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
SREBF1-202ENST00000355815 LINC01549A6NIU2 74 aa11.28□□□□□ -0.6
SREBF1-202ENST00000355815 SRSF1Q07955 248 aaKnown RBP eCLIP11.28□□□□□ -0.62e-7■■■■■ 30.5
SREBF1-202ENST00000355815 LY6EQ16553 131 aa11.28□□□□□ -0.6
SREBF1-202ENST00000355815 PIP4P1Q86T03 277 aa11.28□□□□□ -0.6
SREBF1-202ENST00000355815 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
SREBF1-202ENST00000355815 WT1-ASQ06250 92 aa11.28□□□□□ -0.6
SREBF1-202ENST00000355815 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
SREBF1-202ENST00000355815 C1orf229Q6ZS94 237 aaPredicted RBP11.28□□□□□ -0.6
SREBF1-202ENST00000355815 POLQO75417 2590 aa11.28□□□□□ -0.6
SREBF1-202ENST00000355815 TMEM14BQ9NUH8 114 aa11.27□□□□□ -0.6
SREBF1-202ENST00000355815 DPM3Q9P2X0 92 aa11.27□□□□□ -0.6
SREBF1-202ENST00000355815 DKK2Q9UBU2 259 aa11.27□□□□□ -0.6
SREBF1-202ENST00000355815 ERG28Q9UKR5 140 aa11.27□□□□□ -0.6
SREBF1-202ENST00000355815 PDLIM4P50479 330 aa11.27□□□□□ -0.61
SREBF1-202ENST00000355815 TMEM249Q2WGJ8 235 aa11.27□□□□□ -0.61
SREBF1-202ENST00000355815 C8orf46Q8TAG6 207 aa11.27□□□□□ -0.61
SREBF1-202ENST00000355815 TOMM7Q9P0U1 55 aa11.27□□□□□ -0.61
SREBF1-202ENST00000355815 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
SREBF1-202ENST00000355815 IGHV3-11P01762 117 aa11.27□□□□□ -0.61
SREBF1-202ENST00000355815 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.61
SREBF1-202ENST00000355815 BOD1L2Q8IYS8 172 aa11.27□□□□□ -0.61
SREBF1-202ENST00000355815 CPAMD8Q8IZJ3 1885 aa11.27□□□□□ -0.61
SREBF1-202ENST00000355815 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
SREBF1-202ENST00000355815 NPIPB6E9PJ23 425 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 ASIPP42127 132 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 CCDC144NLQ6NUI1 221 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 DOPEY1Q5JWR5 2465 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 SRD5A1P18405 259 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 MORN5Q5VZ52 161 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 TAX1BP3O14907 124 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 PPBPP02775 128 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 RHOGP84095 191 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 HIVEP3Q5T1R4 2406 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 NUP37Q8NFH4 326 aa11.26□□□□□ -0.61
SREBF1-202ENST00000355815 E7EUB6 86 aa11.25□□□□□ -0.61
SREBF1-202ENST00000355815 SH2D1AO60880 128 aa11.25□□□□□ -0.61
SREBF1-202ENST00000355815 CEACAM4O75871 244 aa11.25□□□□□ -0.61
SREBF1-202ENST00000355815 NAV2Q8IVL1 2488 aa11.25□□□□□ -0.61
SREBF1-202ENST00000355815 RITA1Q96K30 269 aa11.25□□□□□ -0.61
SREBF1-202ENST00000355815 WFDC2Q14508 124 aa11.25□□□□□ -0.61
SREBF1-202ENST00000355815 C3orf56Q8N813 242 aa11.24□□□□□ -0.61
SREBF1-202ENST00000355815 ATG2AQ2TAZ0 1938 aa11.24□□□□□ -0.61
SREBF1-202ENST00000355815 IGLV3-9A0A075B6K5 115 aa11.24□□□□□ -0.61
SREBF1-202ENST00000355815 LAGE3Q14657 143 aa11.24□□□□□ -0.61
SREBF1-202ENST00000355815 VGLL1Q99990 258 aa11.24□□□□□ -0.61
SREBF1-202ENST00000355815 IGHV1-3A0A0C4DH29 117 aa11.24□□□□□ -0.61
SREBF1-202ENST00000355815 Q86TA4 180 aa11.23□□□□□ -0.61
SREBF1-202ENST00000355815 SMIM20Q8N5G0 67 aa11.23□□□□□ -0.61
SREBF1-202ENST00000355815 CTSZQ9UBR2 303 aa11.23□□□□□ -0.61
SREBF1-202ENST00000355815 ATP5G2Q06055 141 aa11.23□□□□□ -0.61
SREBF1-202ENST00000355815 C14orf178Q8N769 122 aaPredicted RBP11.23□□□□□ -0.61
SREBF1-202ENST00000355815 VCX2Q9H322 139 aa11.23□□□□□ -0.61
SREBF1-202ENST00000355815 SMIM27A0A1W2PRY6 76 aa11.23□□□□□ -0.61
SREBF1-202ENST00000355815 NDUFS7O75251 213 aa11.23□□□□□ -0.61
SREBF1-202ENST00000355815 LOXP28300 417 aaPredicted RBP11.23□□□□□ -0.61
SREBF1-202ENST00000355815 CRYBA4P53673 196 aa11.23□□□□□ -0.61
SREBF1-202ENST00000355815 IGKV1OR2-108A0A075B7D4 117 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 FAM90A9PA6NNJ1 464 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 FAM106CPP0CH98 169 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 PSMG4Q5JS54 123 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 SIGLEC8Q9NYZ4 499 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 WDFY3Q8IZQ1 3526 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 TOMM40O96008 361 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 TMEM75Q8N9X5 138 aa11.22□□□□□ -0.61
SREBF1-202ENST00000355815 TMEM167AQ8TBQ9 72 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms