RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 RIGQ13278 110 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 POM121L12Q8N7R1 296 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 C17orf77Q96MU5 243 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 PRDM14Q9GZV8 571 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 FSCN3Q9NQT6 498 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 CGB1A6NKQ9 187 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 C10orf142B7Z368 130 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 M0R135 149 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 CKS2P33552 79 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 C20orf204Q6ZNR8 217 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 ZNF799Q96GE5 643 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 SDK2Q58EX2 2172 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 URB1O60287 2271 aaKnown RBP7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 ADAMTS9Q9P2N4 1935 aa7.03□□□□□ -1.28
RBFOX1-203ENST00000355637 WI2-2373I1.2A0A1W2PRP0 233 aa7.02□□□□□ -1.28
RBFOX1-203ENST00000355637 ZNF815PA8K554 130 aa7.02□□□□□ -1.28
RBFOX1-203ENST00000355637 SBSPONQ8IVN8 264 aa7.02□□□□□ -1.28
RBFOX1-203ENST00000355637 C20orf173Q96LM9 149 aa7.02□□□□□ -1.28
RBFOX1-203ENST00000355637 MRPL20Q9BYC9 149 aaKnown RBP7.02□□□□□ -1.28
RBFOX1-203ENST00000355637 C19orf71A6NCJ1 209 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 HS3ST6Q96QI5 342 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 SLC25A2Q9BXI2 301 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 AGPAT4-IT1Q9H0P7 198 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 DOCK10Q96BY6 2186 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 TRBV7-7A0A0K0K1E9 115 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 CCL1P22362 96 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 NDUFA11Q86Y39 141 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 SPTSSAQ969W0 71 aa7.02□□□□□ -1.29
RBFOX1-203ENST00000355637 FAM186AA6NE01 2351 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 TMEM178BH3BS89 294 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 PATE4P0C8F1 98 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 C17orf98A8MV24 154 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 IGHG3P01860 377 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 Q6P435 159 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 ORMDL3Q8N138 153 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 Q96MF0 132 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 DPH3P1Q9H4G8 78 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 LYZL6O75951 148 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 PSMG4Q5JS54 123 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 VKORC1L1Q8N0U8 176 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 SHANK2-AS3Q9BTD1 123 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 METRNQ9UJH8 293 aa7.01□□□□□ -1.29
RBFOX1-203ENST00000355637 TNCP24821 2201 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 FAM90A23PA8MXZ1 464 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 FCGR3BO75015 233 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 FAM90A15PP0C7V4 464 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 FAM90A13PP0C7W8 464 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 FAM90A14PP0C7W9 464 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 IGHV5-10-1A0A0J9YXX1 117 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 TCRAP04437 139 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 CCL3P10147 92 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 MAGEA5P43359 124 aa7□□□□□ -1.29
RBFOX1-203ENST00000355637 ZNF837Q96EG3 531 aaPredicted RBP7□□□□□ -1.29
RBFOX1-203ENST00000355637 COL4A2P08572 1712 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 IGLV3-12A0A075B6K2 115 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 ZNHIT1O43257 154 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 NPC2P61916 151 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 PRO1854Q9UHT4 67 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 FAM90A20PA6NIJ5 464 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 CD177Q8N6Q3 437 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 WDR31Q8NA23 367 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 KLK15Q9H2R5 256 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 CFAP54Q96N23 3096 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 SPRY2O43597 315 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 PLGLB1Q02325 96 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 EBI3Q14213 229 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 ATXN8Q156A1 80 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 KLHL30-AS1Q8NEE0 82 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 PAXXQ9BUH6 204 aa6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 SLC25A10Q9UBX3 287 aaPredicted RBP6.99□□□□□ -1.29
RBFOX1-203ENST00000355637 SPINT2O43291 252 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 IGHV3-9P01782 118 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 SYNJ2BPP57105 145 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 MORN5Q5VZ52 161 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 FAM53AQ6NSI3 398 aaPredicted RBP6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 PRNTQ86SH4 94 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 PLEKHB2Q96CS7 222 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 OTORQ9NRC9 128 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 ATOX1O00244 68 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 UBE2D1P51668 147 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 DNAJC13O75165 2243 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 CXCL13O43927 109 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 IGLV2-14P01704 120 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 RHOHQ15669 191 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 VMA21Q3ZAQ7 101 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 C11orf53Q8IXP5 236 aa6.98□□□□□ -1.29
RBFOX1-203ENST00000355637 FGF12P61328 243 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 PMAIP1Q13794 54 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 CPAMD8Q8IZJ3 1885 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 IGLV3-32A0A0A0MS00 114 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 CFC1BP0CG36 223 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 CFC1P0CG37 223 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 ZNF32P17041 273 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 KRTAP27-1Q3LI81 207 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 ZNF329Q86UD4 541 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 PIFOQ8TCI5 191 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 U3KQE9 123 aa6.97□□□□□ -1.29
RBFOX1-203ENST00000355637 NDUFC2O95298 119 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms