RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 NDFIP1Q9BT67 221 aa13.03□□□□□ -0.32
VPS13B-201ENST00000355155 TRAV2A0A0B4J234 112 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 CA1P00915 261 aaPredicted RBP13.02□□□□□ -0.33
VPS13B-201ENST00000355155 CT45A10P0DMU9 189 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 ZNF138P52744 262 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 DCANP1Q8TF63 244 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 LINC00477Q96M19 166 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 AGPAT4-IT1Q9H0P7 198 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 IGHV3-49A0A0A0MS15 119 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 A0A1B0GW15 77 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 HAX1O00165 279 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 SMUG1Q53HV7 270 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 RNF182Q8N6D2 247 aa13.02□□□□□ -0.33
VPS13B-201ENST00000355155 MRPL18Q9H0U6 180 aaKnown RBP13.02□□□□□ -0.33
VPS13B-201ENST00000355155 SH2D1AO60880 128 aa13.01□□□□□ -0.33
VPS13B-201ENST00000355155 S100A8P05109 93 aa13.01□□□□□ -0.33
VPS13B-201ENST00000355155 IGFL4Q6B9Z1 124 aa13.01□□□□□ -0.33
VPS13B-201ENST00000355155 ZNF575Q86XF7 245 aa13.01□□□□□ -0.33
VPS13B-201ENST00000355155 IGHV3OR16-13A0A075B7E8 117 aa13.01□□□□□ -0.33
VPS13B-201ENST00000355155 IGHV3-74A0A0B4J1X5 117 aa13.01□□□□□ -0.33
VPS13B-201ENST00000355155 HOXD3P31249 432 aaPredicted RBP13.01□□□□□ -0.33
VPS13B-201ENST00000355155 NDUFA6P56556 154 aa13.01□□□□□ -0.33
VPS13B-201ENST00000355155 HIST3H2BBQ8N257 126 aa13.01□□□□□ -0.33
VPS13B-201ENST00000355155 ESDP10768 282 aa13□□□□□ -0.33
VPS13B-201ENST00000355155 Q0VG73 95 aa13□□□□□ -0.33
VPS13B-201ENST00000355155 LINC01559Q495D7 138 aa13□□□□□ -0.33
VPS13B-201ENST00000355155 ASCL2Q99929 193 aa13□□□□□ -0.33
VPS13B-201ENST00000355155 CSPG4Q6UVK1 2322 aa13□□□□□ -0.33
VPS13B-201ENST00000355155 LINC01619G3V211 115 aa13□□□□□ -0.33
VPS13B-201ENST00000355155 CBLN1P23435 193 aa13□□□□□ -0.33
VPS13B-201ENST00000355155 HIST1H1AQ02539 215 aaPredicted RBP13□□□□□ -0.33
VPS13B-201ENST00000355155 HELZ2Q9BYK8 2649 aaKnown RBP13□□□□□ -0.33
VPS13B-201ENST00000355155 ZANQ9Y493 2812 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 IFITM10A6NMD0 228 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 SNURFLB1AK76 121 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 TCF24Q7RTU0 167 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 OR2D3Q8NGH3 330 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 ZNF418Q8TF45 676 aaPredicted RBP12.99□□□□□ -0.33
VPS13B-201ENST00000355155 GPR61Q9BZJ8 451 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 C2orf70A6NJV1 201 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 FRMD6-AS1P0C7T7 363 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 TCL1AP56279 114 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 FHL3Q13643 280 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 ODF3Q96PU9 254 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 JMJD8Q96S16 334 aa12.99□□□□□ -0.33
VPS13B-201ENST00000355155 ZNF80P51504 273 aaPredicted RBP12.98□□□□□ -0.33
VPS13B-201ENST00000355155 XKRY2A2RUG3 117 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 LY6G6DO95868 133 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 ERCC8Q13216 396 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 TMEM78Q5T7P6 136 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 GDF5OSQ5U4N7 250 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 DUX5Q96PT3 197 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 FABP5P3A8MUU1 101 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 CRISP2P16562 243 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 SRD5A1P18405 259 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 CTRLP40313 264 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 ID1P41134 155 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 HBBP68871 147 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 CNFNQ9BYD5 112 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 CREBBPQ92793 2442 aa12.98□□□□□ -0.33
VPS13B-201ENST00000355155 TEX15Q9BXT5 2789 aa12.97□□□□□ -0.33
VPS13B-201ENST00000355155 K7EQG2 157 aa12.97□□□□□ -0.33
VPS13B-201ENST00000355155 IGLC6P0CF74 106 aa12.97□□□□□ -0.33
VPS13B-201ENST00000355155 PACRGQ96M98 296 aaPredicted RBP12.97□□□□□ -0.33
VPS13B-201ENST00000355155 UNC79Q9P2D8 2635 aa12.97□□□□□ -0.33
VPS13B-201ENST00000355155 OR10J3Q5JRS4 329 aa12.97□□□□□ -0.33
VPS13B-201ENST00000355155 ADAMTSL5Q6ZMM2 481 aa12.97□□□□□ -0.33
VPS13B-201ENST00000355155 Q8TAT8 98 aa12.96□□□□□ -0.33
VPS13B-201ENST00000355155 TMEM189A5PLL7 270 aa12.96□□□□□ -0.34
VPS13B-201ENST00000355155 EDN2P20800 178 aa12.96□□□□□ -0.34
VPS13B-201ENST00000355155 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.34
VPS13B-201ENST00000355155 ZNF493Q6ZR52 646 aa12.96□□□□□ -0.34
VPS13B-201ENST00000355155 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.34
VPS13B-201ENST00000355155 SYNJ2BPP57105 145 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 MRPL54Q6P161 138 aaKnown RBP12.95□□□□□ -0.34
VPS13B-201ENST00000355155 LINC00518Q8N0U6 118 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 OR1N2Q8NGR9 330 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 PEMTQ9UBM1 199 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 OR8A1Q8NGG7 326 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 LINC01006Q8NI28 216 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 MS4A6AQ9H2W1 248 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
VPS13B-201ENST00000355155 A8MTW9 85 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 APCSP02743 223 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 RIGQ13278 110 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 DNLZQ5SXM8 178 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 C18orf65Q6ZTR6 163 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 ZFAND2AQ8N6M9 145 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 TP53TG3Q9ULZ0 132 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 A0A1B0GUT8 65 aa12.94□□□□□ -0.34
VPS13B-201ENST00000355155 SMIM6P0DI80 62 aa12.93□□□□□ -0.34
VPS13B-201ENST00000355155 PGLYRP4Q96LB8 373 aa12.93□□□□□ -0.34
VPS13B-201ENST00000355155 CSN3P07498 182 aa12.93□□□□□ -0.34
VPS13B-201ENST00000355155 OR9G4Q8NGQ1 327 aa12.93□□□□□ -0.34
VPS13B-201ENST00000355155 SLAQ13239 276 aa12.92□□□□□ -0.34
VPS13B-201ENST00000355155 OR11H1Q8NG94 326 aa12.92□□□□□ -0.34
VPS13B-201ENST00000355155 M0QZ24 198 aa12.91□□□□□ -0.34
VPS13B-201ENST00000355155 SLURP1P55000 103 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms