RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 APOC4P55056 127 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 GAGE2AQ6NT46 116 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 PRSS33Q8NF86 280 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 FNDC1Q4ZHG4 1894 aaPredicted RBP10.53□□□□□ -0.72
SCN8A-202ENST00000355133 USF3Q68DE3 2245 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 IGLV1-44P01699 117 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 GAGE2BQ13066 116 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 ABCA4P78363 2273 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 A0A1B0GUS0 222 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 FAM104BQ5XKR9 115 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 H3BRN7 92 aa10.53□□□□□ -0.72
SCN8A-202ENST00000355133 C15orf65H3BRN8 121 aa10.52□□□□□ -0.72
SCN8A-202ENST00000355133 OVOL2Q9BRP0 275 aa10.52□□□□□ -0.72
SCN8A-202ENST00000355133 NDUFS7O75251 213 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 CGB3P0DN86 165 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 PI4KAP42356 2102 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 HAPLN4Q86UW8 402 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 LINC00311Q8N616 119 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 TICRRQ7Z2Z1 1910 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 SDHAF1A6NFY7 115 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 GRNP28799 593 aaKnown RBP10.52□□□□□ -0.73
SCN8A-202ENST00000355133 ASPHD1Q5U4P2 390 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 C1orf147Q96MC9 270 aaPredicted RBP10.52□□□□□ -0.73
SCN8A-202ENST00000355133 GPR179Q6PRD1 2367 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 C9JQL5 133 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 NXPH4O95158 308 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 PYY3Q5JQD4 70 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 Q8N8P6 123 aa10.52□□□□□ -0.73
SCN8A-202ENST00000355133 PRR25Q96S07 402 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 NCOR1P1Q9H4R4 102 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 TMEM243Q9BU79 118 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 ARFGEF3Q5TH69 2177 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 TMEM141Q96I45 108 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 PLXNA3P51805 1871 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 PKDREJQ9NTG1 2253 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 C9JAW5 83 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 MRPL51Q4U2R6 128 aaKnown RBP10.51□□□□□ -0.73
SCN8A-202ENST00000355133 ARTNQ5T4W7 220 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 DNAJC30Q96LL9 226 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 DOCK7Q96N67 2140 aa10.51□□□□□ -0.73
SCN8A-202ENST00000355133 ZFAND6Q6FIF0 208 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 THAP8Q8NA92 274 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 MRAPQ8TCY5 172 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 SNHG12Q9BXW3 62 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 E9PQ18 207 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 CFPP27918 469 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 C18orf32Q8TCD1 76 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 IGFBPL1Q8WX77 278 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 IGHV7-4-1A0A0J9YVY3 117 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 ZNF726P1Q15940 193 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 PRSS57Q6UWY2 283 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 IGF2BP2-AS1Q96M15 143 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 ABCA1O95477 2261 aa10.5□□□□□ -0.73
SCN8A-202ENST00000355133 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
SCN8A-202ENST00000355133 RSPO1Q2MKA7 263 aaPredicted RBP10.5□□□□□ -0.73
SCN8A-202ENST00000355133 HLA-DRB4P13762 266 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 DEFB112Q30KQ8 113 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 LURAP1LQ8IV03 231 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 HLA-DRB4X5D2U9 266 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 K7EM74 188 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 NBL1P41271 181 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 CLPSL2Q6UWE3 100 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 TMEM126AQ9H061 195 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 HOXB4P17483 251 aaPredicted RBP10.49□□□□□ -0.73
SCN8A-202ENST00000355133 VWC2Q2TAL6 325 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 SIP14410 1827 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 IGHV4-59P01825 116 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 PIP4P1Q86T03 277 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 DOCK8Q8NF50 2099 aa10.49□□□□□ -0.73
SCN8A-202ENST00000355133 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 ZSWIM8A7E2V4 1837 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 DOCK10Q96BY6 2186 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 C22orf46C9J442 243 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 PTPRDP23468 1912 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 CGB7P0DN87 165 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 Q0VG73 95 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 CT83Q5H943 113 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 TMEM14CQ9P0S9 112 aa10.48□□□□□ -0.73
SCN8A-202ENST00000355133 ZC2HC1AQ96GY0 325 aa10.47□□□□□ -0.73
SCN8A-202ENST00000355133 ELANEP08246 267 aa10.47□□□□□ -0.73
SCN8A-202ENST00000355133 RSPO3Q9BXY4 272 aaPredicted RBP10.47□□□□□ -0.73
SCN8A-202ENST00000355133 IGHV2-5P01817 119 aa10.47□□□□□ -0.73
SCN8A-202ENST00000355133 RNASE13Q5GAN3 156 aaKnown RBP10.47□□□□□ -0.73
SCN8A-202ENST00000355133 PRB1P04280 392 aa10.47□□□□□ -0.73
SCN8A-202ENST00000355133 IGLC1P0CG04 106 aa10.47□□□□□ -0.73
SCN8A-202ENST00000355133 F6UB75 175 aa10.46□□□□□ -0.73
SCN8A-202ENST00000355133 WT1P19544 449 aaPredicted RBP10.46□□□□□ -0.73
SCN8A-202ENST00000355133 TCF15Q12870 199 aa10.46□□□□□ -0.73
SCN8A-202ENST00000355133 DEFB136Q30KP8 78 aa10.46□□□□□ -0.73
SCN8A-202ENST00000355133 ANGP03950 147 aaKnown RBP10.46□□□□□ -0.73
SCN8A-202ENST00000355133 A0A0J9YY99 117 aa10.46□□□□□ -0.73
SCN8A-202ENST00000355133 HLA-DMBP28068 263 aa10.46□□□□□ -0.73
SCN8A-202ENST00000355133 SLAQ13239 276 aa10.46□□□□□ -0.74
SCN8A-202ENST00000355133 EDA2RQ9HAV5 297 aa10.46□□□□□ -0.74
SCN8A-202ENST00000355133 V9GYV3 84 aa10.46□□□□□ -0.74
SCN8A-202ENST00000355133 PRSS29PA6NIE9 313 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms