RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 MED14OSP0DP75 135 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 KIR2DS2P43631 304 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 APOC4P55056 127 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 ATP5G2Q06055 141 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 ZNF585BQ52M93 769 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 BOD1L2Q8IYS8 172 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 LGI3Q8N145 548 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 OR5AN1Q8NGI8 311 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 TXNDC17Q9BRA2 123 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 MS4A6AQ9H2W1 248 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 TECRQ9NZ01 308 aaKnown RBP8.34□□□□□ -1.07
RTN3-204ENST00000354497 ERG28Q9UKR5 140 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 DNAH6Q9C0G6 4158 aa8.34□□□□□ -1.07
RTN3-204ENST00000354497 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
RTN3-204ENST00000354497 FAM90A23PA8MXZ1 464 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 ADMP35318 185 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 LINC00205P59089 165 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 WFDC3Q8IUB2 231 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 TMEM61Q8N0U2 210 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 KCNS1Q96KK3 526 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 HARBI1Q96MB7 349 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 DERL1Q9BUN8 251 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 GNB1LQ9BYB4 327 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 COMMD5Q9GZQ3 224 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 NPVFQ9HCQ7 196 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 PSG8Q9UQ74 426 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 TP53TG1Q9Y2A0 90 aa8.33□□□□□ -1.08
RTN3-204ENST00000354497 LSM5Q9Y4Y9 91 aaKnown RBP8.33□□□□□ -1.08
RTN3-204ENST00000354497 TRAV8-6A0A0B4J262 113 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 CRXO43186 299 aaPredicted RBP8.32□□□□□ -1.08
RTN3-204ENST00000354497 PDCD6O75340 191 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 NPY1RP25929 384 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 CRYBB3P26998 211 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 MEF2BQ02080 365 aaPredicted RBP8.32□□□□□ -1.08
RTN3-204ENST00000354497 SMAGPQ0VAQ4 97 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 TM4SF20Q53R12 229 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 FFAR4Q5NUL3 377 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 FAM162BQ5T6X4 162 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 SPIN2AQ99865 258 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 SPIN2BQ9BPZ2 258 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 RFNGQ9Y644 331 aa8.32□□□□□ -1.08
RTN3-204ENST00000354497 FAM223BA6NKX1 122 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 TMEM14DPA8MWL7 114 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 ZNF324O75467 553 aaPredicted RBP8.31□□□□□ -1.08
RTN3-204ENST00000354497 OR9G9P0C7N8 305 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 C3orf79P0CE67 100 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 NANOS2P60321 138 aaKnown RBP8.31□□□□□ -1.08
RTN3-204ENST00000354497 TNXAQ16473 311 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 Q6ZVH6 145 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 MOB1BQ7L9L4 216 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 PDPNQ86YL7 162 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 FAM223AQ8IWN6 122 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 OR10G8Q8NGN5 311 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 OR52E5Q8NH55 327 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 KCNG3Q8TAE7 436 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 C18orf32Q8TCD1 76 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 GLMPQ8WWB7 406 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 GRAMD2BQ96HH9 432 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 OR1A1Q9P1Q5 309 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 GNG13Q9P2W3 67 aa8.31□□□□□ -1.08
RTN3-204ENST00000354497 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.3□□□□□ -1.08
RTN3-204ENST00000354497 FAM90A7PA6NKC0 464 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 CBLN1P23435 193 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 KRTDAPP60985 99 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 TMEM187Q14656 261 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 MPV17L2Q567V2 206 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 C5orf47Q569G3 176 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 LINC00336Q6ZUF6 198 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 BAGE3Q86Y29 109 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 BAGE2Q86Y30 109 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 STPG3Q8N7X2 389 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 Q96M66 194 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 ATP5SQ99766 215 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 VCX2Q9H322 139 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 TIMM9Q9Y5J7 89 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 LY96Q9Y6Y9 160 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 DNAH11Q96DT5 4516 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 FAT2Q9NYQ8 4349 aa8.3□□□□□ -1.08
RTN3-204ENST00000354497 A0A1B0GW15 77 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 OR2J3O76001 311 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 IGHV3-23P01764 117 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 HIST1H1DP16402 221 aaKnown RBP8.29□□□□□ -1.08
RTN3-204ENST00000354497 RPL35AP18077 110 aaKnown RBP8.29□□□□□ -1.08
RTN3-204ENST00000354497 RPL24P83731 157 aaKnown RBP8.29□□□□□ -1.08
RTN3-204ENST00000354497 TMEM97Q5BJF2 176 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 RBPMS2Q6ZRY4 209 aaKnown RBP8.29□□□□□ -1.08
RTN3-204ENST00000354497 TTC9CQ8N5M4 171 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 TMEM252Q8N6L7 170 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 GVQW1Q8N7I0 195 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 VSTM2AQ8TAG5 236 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 RNF183Q96D59 192 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 WDR61Q9GZS3 305 aaKnown RBP8.29□□□□□ -1.08
RTN3-204ENST00000354497 GTSF1LQ9H1H1 148 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 DNAH2Q9P225 4427 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 PGPEP1LA6NFU8 196 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
RTN3-204ENST00000354497 IGLV2-23P01705 113 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 PSMB3P49720 205 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 RPL32P62910 135 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms