RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CSN3P07498 182 aa15.48■□□□□ 0.07
TRIM4-202ENST00000354241 ID1P41134 155 aa15.48■□□□□ 0.07
TRIM4-202ENST00000354241 SAMD13Q5VXD3 122 aa15.48■□□□□ 0.07
TRIM4-202ENST00000354241 KCNIP4Q6PIL6 250 aa15.48■□□□□ 0.07
TRIM4-202ENST00000354241 FAM231DQ6ZW35 169 aa15.48■□□□□ 0.07
TRIM4-202ENST00000354241 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.48■□□□□ 0.07
TRIM4-202ENST00000354241 NUDT10Q8NFP7 164 aa15.48■□□□□ 0.07
TRIM4-202ENST00000354241 NUDT11Q96G61 164 aa15.48■□□□□ 0.07
TRIM4-202ENST00000354241 ZC2HC1AQ96GY0 325 aa15.48■□□□□ 0.07
TRIM4-202ENST00000354241 ADARB2-AS1A8MUL3 147 aa15.47■□□□□ 0.07
TRIM4-202ENST00000354241 GATCO43716 136 aaKnown RBP15.47■□□□□ 0.07
TRIM4-202ENST00000354241 LINC00322Q6ZN03 302 aaPredicted RBP15.47■□□□□ 0.07
TRIM4-202ENST00000354241 DYNLRB2Q8TF09 96 aa15.47■□□□□ 0.07
TRIM4-202ENST00000354241 FAM3BP58499 235 aaPredicted RBP15.47■□□□□ 0.07
TRIM4-202ENST00000354241 DAZAP1Q96EP5 407 aaKnown RBP15.47■□□□□ 0.07
TRIM4-202ENST00000354241 PRR25Q96S07 402 aa15.47■□□□□ 0.07
TRIM4-202ENST00000354241 IL36BQ9NZH7 164 aa15.47■□□□□ 0.07
TRIM4-202ENST00000354241 ZNF492Q9P255 531 aa15.47■□□□□ 0.07
TRIM4-202ENST00000354241 SETD2Q9BYW2 2564 aaPredicted RBP15.46■□□□□ 0.07
TRIM4-202ENST00000354241 A0A1W2PPQ1 181 aa15.46■□□□□ 0.07
TRIM4-202ENST00000354241 RAB5AP20339 215 aa15.46■□□□□ 0.07
TRIM4-202ENST00000354241 SAPCD1Q5SSQ6 148 aa15.46■□□□□ 0.07
TRIM4-202ENST00000354241 IMMP2LQ96T52 175 aa15.46■□□□□ 0.07
TRIM4-202ENST00000354241 NDFIP1Q9BT67 221 aa15.46■□□□□ 0.07
TRIM4-202ENST00000354241 C2CD3Q4AC94 2353 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 OVOL1O14753 267 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 ZNF705DP0CH99 300 aaPredicted RBP15.45■□□□□ 0.06
TRIM4-202ENST00000354241 ZNF705BP0CI00 300 aaPredicted RBP15.45■□□□□ 0.06
TRIM4-202ENST00000354241 FOXL1Q12952 345 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 TMEM78Q5T7P6 136 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 AGPAT4-IT1Q9H0P7 198 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 CT45A10P0DMU9 189 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 DEFB1P60022 68 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 NDUFA11Q86Y39 141 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 GPR61Q9BZJ8 451 aa15.45■□□□□ 0.06
TRIM4-202ENST00000354241 C19orf71A6NCJ1 209 aa15.44■□□□□ 0.06
TRIM4-202ENST00000354241 K7EQG2 157 aa15.44■□□□□ 0.06
TRIM4-202ENST00000354241 CA1P00915 261 aaPredicted RBP15.44■□□□□ 0.06
TRIM4-202ENST00000354241 P01737 135 aa15.44■□□□□ 0.06
TRIM4-202ENST00000354241 PAFAH1B2P68402 229 aa15.44■□□□□ 0.06
TRIM4-202ENST00000354241 OR10J6PQ8NGY7 276 aa15.44■□□□□ 0.06
TRIM4-202ENST00000354241 FAM210BQ96KR6 192 aa15.44■□□□□ 0.06
TRIM4-202ENST00000354241 ZNF688P0C7X2 276 aa15.43■□□□□ 0.06
TRIM4-202ENST00000354241 RBPMS2Q6ZRY4 209 aaKnown RBP15.43■□□□□ 0.06
TRIM4-202ENST00000354241 C9orf47Q6ZRZ4 202 aa15.43■□□□□ 0.06
TRIM4-202ENST00000354241 TRBV24-1A0A075B6N3 115 aa15.43■□□□□ 0.06
TRIM4-202ENST00000354241 ZNF138P52744 262 aa15.43■□□□□ 0.06
TRIM4-202ENST00000354241 WNK1Q9H4A3 2382 aa15.42■□□□□ 0.06
TRIM4-202ENST00000354241 F6UB75 175 aa15.42■□□□□ 0.06
TRIM4-202ENST00000354241 SNRPD3P62318 126 aaKnown RBP15.42■□□□□ 0.06
TRIM4-202ENST00000354241 PSMG4Q5JS54 123 aa15.42■□□□□ 0.06
TRIM4-202ENST00000354241 RPP21Q9H633 154 aaKnown RBP15.42■□□□□ 0.06
TRIM4-202ENST00000354241 RPS10P46783 165 aaKnown RBP15.41■□□□□ 0.06
TRIM4-202ENST00000354241 CRIP1P50238 77 aa15.41■□□□□ 0.06
TRIM4-202ENST00000354241 TCL1AP56279 114 aa15.41■□□□□ 0.06
TRIM4-202ENST00000354241 HIST1H1AQ02539 215 aaPredicted RBP15.41■□□□□ 0.06
TRIM4-202ENST00000354241 DEFB114Q30KQ6 69 aa15.41■□□□□ 0.06
TRIM4-202ENST00000354241 TMEM61Q8N0U2 210 aa15.41■□□□□ 0.06
TRIM4-202ENST00000354241 OR8A1Q8NGG7 326 aa15.41■□□□□ 0.06
TRIM4-202ENST00000354241 PYGO2Q9BRQ0 406 aa15.41■□□□□ 0.06
TRIM4-202ENST00000354241 NPIPB6E9PJ23 425 aa15.4■□□□□ 0.06
TRIM4-202ENST00000354241 COX8CQ7Z4L0 72 aa15.4■□□□□ 0.06
TRIM4-202ENST00000354241 LINC00518Q8N0U6 118 aa15.4■□□□□ 0.06
TRIM4-202ENST00000354241 FAM162BQ5T6X4 162 aa15.39■□□□□ 0.05
TRIM4-202ENST00000354241 LINC00477Q96M19 166 aa15.39■□□□□ 0.05
TRIM4-202ENST00000354241 SMIM27A0A1W2PRY6 76 aa15.39■□□□□ 0.05
TRIM4-202ENST00000354241 SH2D1AO60880 128 aa15.39■□□□□ 0.05
TRIM4-202ENST00000354241 CD300EQ496F6 205 aaPredicted RBP15.39■□□□□ 0.05
TRIM4-202ENST00000354241 ZNF80P51504 273 aaPredicted RBP15.38■□□□□ 0.05
TRIM4-202ENST00000354241 OR4B1Q8NGF8 309 aa15.38■□□□□ 0.05
TRIM4-202ENST00000354241 OR2D3Q8NGH3 330 aa15.38■□□□□ 0.05
TRIM4-202ENST00000354241 TSKUQ8WUA8 353 aa15.37■□□□□ 0.05
TRIM4-202ENST00000354241 PPP1R14DQ9NXH3 145 aa15.37■□□□□ 0.05
TRIM4-202ENST00000354241 PF4P02776 101 aa15.37■□□□□ 0.05
TRIM4-202ENST00000354241 RPL19P84098 196 aaKnown RBP15.37■□□□□ 0.05
TRIM4-202ENST00000354241 CT83Q5H943 113 aa15.37■□□□□ 0.05
TRIM4-202ENST00000354241 BTF3L4Q96K17 158 aa15.37■□□□□ 0.05
TRIM4-202ENST00000354241 SAV1Q9H4B6 383 aaPredicted RBP15.37■□□□□ 0.05
TRIM4-202ENST00000354241 SIGLEC8Q9NYZ4 499 aa15.37■□□□□ 0.05
TRIM4-202ENST00000354241 TRAV9-1A0A075B6T8 112 aa15.36■□□□□ 0.05
TRIM4-202ENST00000354241 A8MWL6 223 aa15.36■□□□□ 0.05
TRIM4-202ENST00000354241 SPINK4O60575 86 aa15.36■□□□□ 0.05
TRIM4-202ENST00000354241 GDF5OSQ5U4N7 250 aa15.36■□□□□ 0.05
TRIM4-202ENST00000354241 TRAV2A0A0B4J234 112 aa15.35■□□□□ 0.05
TRIM4-202ENST00000354241 SAP30O75446 220 aa15.35■□□□□ 0.05
TRIM4-202ENST00000354241 CD33P20138 364 aa15.35■□□□□ 0.05
TRIM4-202ENST00000354241 NEU1Q99519 415 aa15.35■□□□□ 0.05
TRIM4-202ENST00000354241 LENEPQ9Y5L5 61 aa15.35■□□□□ 0.05
TRIM4-202ENST00000354241 C1orf196B1AJZ1 125 aa15.35■□□□□ 0.05
TRIM4-202ENST00000354241 SRD5A3Q9H8P0 318 aa15.35■□□□□ 0.05
TRIM4-202ENST00000354241 NAT8BQ9UHF3 227 aa15.35■□□□□ 0.05
TRIM4-202ENST00000354241 IZUMO1RA6ND01 250 aa15.34■□□□□ 0.05
TRIM4-202ENST00000354241 J3KRW8 73 aa15.34■□□□□ 0.05
TRIM4-202ENST00000354241 TYMSP04818 313 aa15.34■□□□□ 0.05
TRIM4-202ENST00000354241 GZMBP10144 247 aa15.34■□□□□ 0.05
TRIM4-202ENST00000354241 TRAV25A0A0B4J276 109 aa15.33■□□□□ 0.05
TRIM4-202ENST00000354241 TMEM189A5PLL7 270 aa15.33■□□□□ 0.05
TRIM4-202ENST00000354241 FABP5P3A8MUU1 101 aa15.33■□□□□ 0.05
TRIM4-202ENST00000354241 HIGD1CA8MV81 97 aa15.33■□□□□ 0.05
TRIM4-202ENST00000354241 EBLN2Q6P2I7 272 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 462.6 ms