RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CMTM2Q8TAZ6 248 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 GNB1LQ9BYB4 327 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 TRAPPC1Q9Y5R8 145 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 S4R3C0 116 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 DNAH11Q96DT5 4516 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 FAM231BA6NCW3 169 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 IZUMO1RA6ND01 250 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 LINC01548A6NM66 108 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 IFITM10A6NMD0 228 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 ZNF705GA8MUZ8 300 aaPredicted RBP6.27□□□□□ -1.41
CD44-205ENST00000352818 NPIPB6E9PJ23 425 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 IGHV3-23P01764 117 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 CD28P10747 220 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 PPIFP30405 207 aaKnown RBP6.27□□□□□ -1.41
CD44-205ENST00000352818 TCTEX1D4Q5JR98 221 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 FAM209BQ5JX69 171 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 DNLZQ5SXM8 178 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 C16orf54Q6UWD8 224 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 COX8CQ7Z4L0 72 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 OR8I2Q8N0Y5 310 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 KLHDC1Q8N7A1 406 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 OR5R1Q8NH85 324 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 WIPF2Q8TF74 440 aaPredicted RBP6.27□□□□□ -1.41
CD44-205ENST00000352818 TSKUQ8WUA8 353 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 USMG5Q96IX5 58 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 PRSS22Q9GZN4 317 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 AAMDCQ9H7C9 122 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 ZFP30Q9Y2G7 519 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 U3KQE9 123 aa6.27□□□□□ -1.41
CD44-205ENST00000352818 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 SH2D7A6NKC9 451 aaPredicted RBP6.26□□□□□ -1.41
CD44-205ENST00000352818 DIRC3C9JPN6 131 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 H3BTX0 84 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 HLA-DQA1P01909 254 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 CLEC3BP05452 202 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 CD33P20138 364 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 CFHR3Q02985 330 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 PSG3Q16557 428 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 TOMM20LQ6UXN7 152 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 GOLT1AQ6ZVE7 132 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 ATP5L2Q7Z4Y8 100 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 EXOC3-AS1Q8N2X6 119 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 NUDT10Q8NFP7 164 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 NUDT11Q96G61 164 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 C12orf57Q99622 126 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 SLC50A1Q9BRV3 221 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 GFRA4Q9GZZ7 299 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 RPP21Q9H633 154 aaKnown RBP6.26□□□□□ -1.41
CD44-205ENST00000352818 NAT8BQ9UHF3 227 aa6.26□□□□□ -1.41
CD44-205ENST00000352818 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.25□□□□□ -1.41
CD44-205ENST00000352818 XKRY2A2RUG3 117 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 A8MWL6 223 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 BUB3O43684 328 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 IGLV1-40P01703 118 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 TRGV3P03979 118 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 SNRPCP09234 159 aaKnown RBP6.25□□□□□ -1.41
CD44-205ENST00000352818 S100A2P29034 98 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 CSN1S1P47710 185 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 CLEC19AQ6UXS0 136 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 TMEM136Q6ZRR5 245 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 NHLRC2Q8NBF2 726 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 MRPL53Q96EL3 112 aaKnown RBP6.25□□□□□ -1.41
CD44-205ENST00000352818 C17orf77Q96MU5 243 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 RCHY1Q96PM5 261 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 CITED2Q99967 270 aaPredicted RBP6.25□□□□□ -1.41
CD44-205ENST00000352818 MRPL18Q9H0U6 180 aaKnown RBP6.25□□□□□ -1.41
CD44-205ENST00000352818 ZNF331Q9NQX6 463 aaPredicted RBP6.25□□□□□ -1.41
CD44-205ENST00000352818 SERTAD4Q9NUC0 356 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 CLEC5AQ9NY25 188 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 RPH3ALQ9UNE2 315 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 PSG8Q9UQ74 426 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 SMAD5-AS1Q9Y6J3 95 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 DNAH2Q9P225 4427 aa6.25□□□□□ -1.41
CD44-205ENST00000352818 A0A0G2JLM5 398 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 A0A1B0GXF2 115 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 SNURFLB1AK76 121 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 NDUFA4O00483 81 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 P01737 135 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 ESDP10768 282 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 CBLN1P23435 193 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 ARL3P36405 182 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 TPPP2P59282 170 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 LY6EQ16553 131 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 C9orf152Q5JTZ5 239 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 PRR27Q6MZM9 219 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 NDUFA11Q86Y39 141 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 GBGT1Q8N5D6 347 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 MS4A10Q96PG2 267 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 METTL26Q96S19 204 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 NEU1Q99519 415 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 GPR61Q9BZJ8 451 aa6.24□□□□□ -1.41
CD44-205ENST00000352818 TRAV8-1A0A0A6YYK1 113 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 RBAKDNA6NC62 111 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 Q0VG73 95 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 SAPCD1Q5SSQ6 148 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 GFI1BQ5VTD9 330 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 Q6AWC8 147 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.23□□□□□ -1.41
CD44-205ENST00000352818 LINC00322Q6ZN03 302 aaPredicted RBP6.23□□□□□ -1.41
CD44-205ENST00000352818 PRNTQ86SH4 94 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms