RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 RNF125Q96EQ8 232 aa12.01□□□□□ -0.49
LMNA-201ENST00000347559 SPRY4Q9C004 299 aa12.01□□□□□ -0.49
LMNA-201ENST00000347559 MORN3Q6PF18 240 aaPredicted RBP12□□□□□ -0.49
LMNA-201ENST00000347559 LINC01549A6NIU2 74 aa12□□□□□ -0.49
LMNA-201ENST00000347559 K7EM74 188 aa12□□□□□ -0.49
LMNA-201ENST00000347559 GATA4P43694 442 aa12□□□□□ -0.49
LMNA-201ENST00000347559 TAL2Q16559 108 aa12□□□□□ -0.49
LMNA-201ENST00000347559 CACNA1GO43497 2377 aa12□□□□□ -0.49
LMNA-201ENST00000347559 PRSS29PA6NIE9 313 aa12□□□□□ -0.49
LMNA-201ENST00000347559 ZFP2Q6ZN57 461 aa12□□□□□ -0.49
LMNA-201ENST00000347559 DLX4Q92988 240 aaPredicted RBP12□□□□□ -0.49
LMNA-201ENST00000347559 PRR25Q96S07 402 aa12□□□□□ -0.49
LMNA-201ENST00000347559 SIGLEC9Q9Y336 463 aa12□□□□□ -0.49
LMNA-201ENST00000347559 BOD1L1Q8NFC6 3051 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 TRAV26-2A0A0B4J265 109 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 VSTM5A8MXK1 200 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 H3BVH4 76 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 FCN3O75636 299 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 CNIH1O95406 144 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 CFAP126Q5VTH2 177 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 POLEQ07864 2286 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 OR11H12B2RN74 326 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 I3L2K1 104 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 LYPD2Q6UXB3 125 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 LYPD1Q8N2G4 141 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 ZNF491Q8N8L2 437 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 OR11H1Q8NG94 326 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 OR11H2Q8NH07 326 aa11.99□□□□□ -0.49
LMNA-201ENST00000347559 TRBV7-3A0A075B6L6 115 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 B5MCH6 92 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 HLA-DMBP28068 263 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 PPP1R27Q86WC6 154 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 TEX22C9J3V5 150 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 TSPAN13O95857 204 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 WT1P19544 449 aaPredicted RBP11.98□□□□□ -0.49
LMNA-201ENST00000347559 CCL17Q92583 94 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 DKK4Q9UBT3 224 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 ERG28Q9UKR5 140 aa11.98□□□□□ -0.49
LMNA-201ENST00000347559 SRSF6Q13247 344 aaKnown RBP11.97□□□□□ -0.49
LMNA-201ENST00000347559 DTX2Q86UW9 622 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 COLQQ9Y215 455 aaPredicted RBP11.97□□□□□ -0.49
LMNA-201ENST00000347559 IGLV3-9A0A075B6K5 115 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 IGHV3OR16-8A0A075B7F1 116 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 CCL11P51671 97 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 CTSZQ9UBR2 303 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 UFC1Q9Y3C8 167 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 IGLC6P0CF74 106 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 HLA-DRB4P13762 266 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 SRSF9Q13242 221 aaKnown RBP eCLIP11.97□□□□□ -0.49
LMNA-201ENST00000347559 HLA-DRB4X5D2U9 266 aa11.97□□□□□ -0.49
LMNA-201ENST00000347559 FAM90A27PA6NNH2 459 aa11.96□□□□□ -0.49
LMNA-201ENST00000347559 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
LMNA-201ENST00000347559 MYMXA0A1B0GTQ4 84 aa11.96□□□□□ -0.5
LMNA-201ENST00000347559 NDUFB3O43676 98 aa11.96□□□□□ -0.5
LMNA-201ENST00000347559 C5orf64Q2M2E5 130 aa11.96□□□□□ -0.5
LMNA-201ENST00000347559 PVRIGQ6DKI7 326 aa11.96□□□□□ -0.5
LMNA-201ENST00000347559 Q8N8P6 123 aa11.96□□□□□ -0.5
LMNA-201ENST00000347559 ZZEF1O43149 2961 aa11.96□□□□□ -0.5
LMNA-201ENST00000347559 A0A087WX48 190 aa11.95□□□□□ -0.5
LMNA-201ENST00000347559 KIR2DL4Q99706 377 aa11.95□□□□□ -0.5
LMNA-201ENST00000347559 MRPS12O15235 138 aaKnown RBP11.95□□□□□ -0.5
LMNA-201ENST00000347559 TRGV3P03979 118 aa11.95□□□□□ -0.5
LMNA-201ENST00000347559 CARD19Q96LW7 228 aa11.95□□□□□ -0.5
LMNA-201ENST00000347559 DMXL2Q8TDJ6 3036 aa11.95□□□□□ -0.5
LMNA-201ENST00000347559 LAGE3Q14657 143 aa11.95□□□□□ -0.5
LMNA-201ENST00000347559 TEX36Q5VZQ5 186 aa11.95□□□□□ -0.5
LMNA-201ENST00000347559 TACC2O95359 2948 aa11.94□□□□□ -0.5
LMNA-201ENST00000347559 K7EIM0 57 aa11.94□□□□□ -0.5
LMNA-201ENST00000347559 ERCC8Q13216 396 aa11.94□□□□□ -0.5
LMNA-201ENST00000347559 VKORC1Q9BQB6 163 aa11.94□□□□□ -0.5
LMNA-201ENST00000347559 CEACAM4O75871 244 aa11.94□□□□□ -0.5
LMNA-201ENST00000347559 IGHV3-23P01764 117 aa11.94□□□□□ -0.5
LMNA-201ENST00000347559 IGHV3-35A0A0C4DH35 117 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 TMEM78Q5T7P6 136 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 ZNF474Q6S9Z5 364 aaPredicted RBP11.93□□□□□ -0.5
LMNA-201ENST00000347559 C22orf34Q6ZV56 151 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 PPDPFLQ8WWR9 84 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 IGHG3P01860 377 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 LGALS1P09382 135 aaKnown RBP11.93□□□□□ -0.5
LMNA-201ENST00000347559 PLNP26678 52 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 ZFAND6Q6FIF0 208 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 TEX29Q8N6K0 151 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 PRSS33Q8NF86 280 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 ATP6V0E2Q8NHE4 81 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 PCNX1Q96RV3 2341 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 GAGE5Q13069 117 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 GAGE6Q13070 117 aa11.93□□□□□ -0.5
LMNA-201ENST00000347559 COX7A1P24310 79 aa11.92□□□□□ -0.5
LMNA-201ENST00000347559 IGFBPL1Q8WX77 278 aa11.92□□□□□ -0.5
LMNA-201ENST00000347559 ZNF815PA8K554 130 aa11.92□□□□□ -0.5
LMNA-201ENST00000347559 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
LMNA-201ENST00000347559 IGHV1-8P0DP01 117 aa11.92□□□□□ -0.5
LMNA-201ENST00000347559 ZNF575Q86XF7 245 aa11.92□□□□□ -0.5
LMNA-201ENST00000347559 LINC00311Q8N616 119 aa11.92□□□□□ -0.5
LMNA-201ENST00000347559 IGLV2-18A0A075B6J9 118 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 H7C1H1 209 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 THBDP07204 575 aa11.91□□□□□ -0.5
LMNA-201ENST00000347559 CRYGBP07316 175 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms