RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 DUX4L9Q6RFH8 374 aaPredicted RBP18.38■□□□□ 0.53
NPAS3-201ENST00000346562 NDUFA12Q9UI09 145 aa18.38■□□□□ 0.53
NPAS3-201ENST00000346562 VPREB3Q9UKI3 123 aa18.38■□□□□ 0.53
NPAS3-201ENST00000346562 UTF1Q5T230 341 aa18.38■□□□□ 0.53
NPAS3-201ENST00000346562 SPTBP11277 2137 aa18.38■□□□□ 0.53
NPAS3-201ENST00000346562 IGLV3-9A0A075B6K5 115 aa18.38■□□□□ 0.53
NPAS3-201ENST00000346562 IGLV1-44P01699 117 aa18.37■□□□□ 0.53
NPAS3-201ENST00000346562 DOCK6Q96HP0 2047 aa18.37■□□□□ 0.53
NPAS3-201ENST00000346562 IGKV2D-24A0A075B6R9 120 aa18.37■□□□□ 0.53
NPAS3-201ENST00000346562 TET1Q8NFU7 2136 aa18.37■□□□□ 0.53
NPAS3-201ENST00000346562 HOXB4P17483 251 aaPredicted RBP18.37■□□□□ 0.53
NPAS3-201ENST00000346562 SMIM2Q9BVW6 85 aa18.37■□□□□ 0.53
NPAS3-201ENST00000346562 DLEU1O43261 78 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 IGKV1-39P01597 117 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 IGKV1D-39P04432 117 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 MRPL53Q96EL3 112 aaKnown RBP18.36■□□□□ 0.53
NPAS3-201ENST00000346562 C18orf32Q8TCD1 76 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 MRAPQ8TCY5 172 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 TEX48A0A1B0GUV7 120 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 GBF1Q92538 1859 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 LY6G6EA0A0G2JKS1 128 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 UBE2V1Q13404 147 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 U3KQA8 63 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 SPINK8P0C7L1 97 aa18.36■□□□□ 0.53
NPAS3-201ENST00000346562 LTBP1Q14766 1721 aa18.35■□□□□ 0.53
NPAS3-201ENST00000346562 WDR86Q86TI4 376 aa18.35■□□□□ 0.53
NPAS3-201ENST00000346562 DKK4Q9UBT3 224 aa18.35■□□□□ 0.53
NPAS3-201ENST00000346562 C9orf66Q5T8R8 295 aa18.35■□□□□ 0.53
NPAS3-201ENST00000346562 IGKV1OR2-108A0A075B7D4 117 aa18.35■□□□□ 0.53
NPAS3-201ENST00000346562 FAM231DQ6ZW35 169 aa18.35■□□□□ 0.53
NPAS3-201ENST00000346562 ICE1Q9Y2F5 2266 aa18.34■□□□□ 0.53
NPAS3-201ENST00000346562 NBL1P41271 181 aa18.33■□□□□ 0.53
NPAS3-201ENST00000346562 TPSG1Q9NRR2 321 aa18.33■□□□□ 0.53
NPAS3-201ENST00000346562 PYGO2Q9BRQ0 406 aa18.33■□□□□ 0.53
NPAS3-201ENST00000346562 HAMPP81172 84 aa18.33■□□□□ 0.52
NPAS3-201ENST00000346562 FHL1Q13642 323 aa18.33■□□□□ 0.52
NPAS3-201ENST00000346562 VOPP1Q96AW1 172 aa18.33■□□□□ 0.52
NPAS3-201ENST00000346562 IGHV2-5P01817 119 aa18.33■□□□□ 0.52
NPAS3-201ENST00000346562 PROK2Q9HC23 129 aa18.33■□□□□ 0.52
NPAS3-201ENST00000346562 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.33■□□□□ 0.52
NPAS3-201ENST00000346562 C20orf78Q9BR46 151 aa18.33■□□□□ 0.52
NPAS3-201ENST00000346562 SMIM27A0A1W2PRY6 76 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 C15orf65H3BRN8 121 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 CLPSL2Q6UWE3 100 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 PRSS57Q6UWY2 283 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 SPANXDQ9BXN6 97 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 NOP10Q9NPE3 64 aaKnown RBP18.32■□□□□ 0.52
NPAS3-201ENST00000346562 DEFB112Q30KQ8 113 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 KAAG1Q9UBP8 84 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 K7EM74 188 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 SPANXA1Q9NS26 97 aa18.32■□□□□ 0.52
NPAS3-201ENST00000346562 CCL24O00175 119 aa18.31■□□□□ 0.52
NPAS3-201ENST00000346562 WT1-ASQ06250 92 aa18.31■□□□□ 0.52
NPAS3-201ENST00000346562 GTSF1LQ9H1H1 148 aa18.31■□□□□ 0.52
NPAS3-201ENST00000346562 SNRNP200O75643 2136 aaKnown RBP18.31■□□□□ 0.52
NPAS3-201ENST00000346562 FAM215AQ9Y5M1 114 aa18.31■□□□□ 0.52
NPAS3-201ENST00000346562 A0A0J9YY99 117 aa18.3■□□□□ 0.52
NPAS3-201ENST00000346562 A0A1B0GUS0 222 aa18.3■□□□□ 0.52
NPAS3-201ENST00000346562 CYYR1Q96J86 154 aa18.3■□□□□ 0.52
NPAS3-201ENST00000346562 RP1P56715 2156 aa18.3■□□□□ 0.52
NPAS3-201ENST00000346562 C8orf31Q8N9H6 132 aa18.3■□□□□ 0.52
NPAS3-201ENST00000346562 SBF1O95248 1867 aa18.3■□□□□ 0.52
NPAS3-201ENST00000346562 DEFB113Q30KQ7 82 aa18.29■□□□□ 0.52
NPAS3-201ENST00000346562 C9orf153Q5TBE3 101 aa18.29■□□□□ 0.52
NPAS3-201ENST00000346562 LGALS9BQ3B8N2 356 aa18.29■□□□□ 0.52
NPAS3-201ENST00000346562 LGALS9CQ6DKI2 356 aa18.29■□□□□ 0.52
NPAS3-201ENST00000346562 ZC2HC1AQ96GY0 325 aa18.29■□□□□ 0.52
NPAS3-201ENST00000346562 NDUFS5O43920 106 aa18.29■□□□□ 0.52
NPAS3-201ENST00000346562 FGF6P10767 208 aa18.28■□□□□ 0.52
NPAS3-201ENST00000346562 MORN5Q5VZ52 161 aa18.28■□□□□ 0.52
NPAS3-201ENST00000346562 IGLC1P0CG04 106 aa18.28■□□□□ 0.52
NPAS3-201ENST00000346562 IGHG4P01861 327 aa18.28■□□□□ 0.52
NPAS3-201ENST00000346562 THSD7BQ9C0I4 1608 aa18.28■□□□□ 0.52
NPAS3-201ENST00000346562 U3KQE9 123 aa18.27■□□□□ 0.52
NPAS3-201ENST00000346562 A8MWP6 167 aa18.27■□□□□ 0.51
NPAS3-201ENST00000346562 IGHV4-59P01825 116 aa18.27■□□□□ 0.51
NPAS3-201ENST00000346562 V9GYV3 84 aa18.27■□□□□ 0.51
NPAS3-201ENST00000346562 COX11Q9Y6N1 276 aa18.27■□□□□ 0.51
NPAS3-201ENST00000346562 ZNF503-AS2A6NEH8 195 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 PYY3Q5JQD4 70 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 SIGLEC8Q9NYZ4 499 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 XCL1P47992 114 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 FOXE3Q13461 319 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 ZNF664Q8N3J9 261 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 hADV29S1A0JD25 119 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 IGHV2-70P01814 119 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 CFHR4Q92496 578 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 C1orf43Q9BWL3 253 aa18.26■□□□□ 0.51
NPAS3-201ENST00000346562 FXYD5Q96DB9 178 aa18.25■□□□□ 0.51
NPAS3-201ENST00000346562 RBAKDNA6NC62 111 aa18.25■□□□□ 0.51
NPAS3-201ENST00000346562 DIAPH2-AS1Q14236 149 aa18.25■□□□□ 0.51
NPAS3-201ENST00000346562 PRSS33Q8NF86 280 aa18.25■□□□□ 0.51
NPAS3-201ENST00000346562 PPDPFLQ8WWR9 84 aa18.25■□□□□ 0.51
NPAS3-201ENST00000346562 SHISA9B4DS77 424 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 PIP4P1Q86T03 277 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 C16orf74Q96GX8 76 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 CITED2Q99967 270 aaPredicted RBP18.24■□□□□ 0.51
NPAS3-201ENST00000346562 ICOSQ9Y6W8 199 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 NPYP01303 97 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 RPL18AQ02543 176 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms