RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 GATA4P43694 442 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 FXYD2P54710 66 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 E7EQL1 145 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 IGLV1-44P01699 117 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 LINC01545Q5VT33 79 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 RNF182Q8N6D2 247 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 LTBP2Q14767 1821 aa12.44□□□□□ -0.42
SRPK1-201ENST00000346162 LY6HO94772 140 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 FOXI1Q12951 378 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 BUB1B-PAK6H3BSN5 160 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 SUMO2P61956 95 aaKnown RBP12.43□□□□□ -0.42
SRPK1-201ENST00000346162 C3orf56Q8N813 242 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 NTN5Q8WTR8 489 aaPredicted RBP12.43□□□□□ -0.42
SRPK1-201ENST00000346162 HIST1H4AP62805 103 aaKnown RBP12.43□□□□□ -0.42
SRPK1-201ENST00000346162 SLC50A1Q9BRV3 221 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 COL8A2P25067 703 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 FAM104BQ5XKR9 115 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 Q86TA4 180 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 C20orf78Q9BR46 151 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 TP73-AS1Q9UF72 201 aa12.43□□□□□ -0.42
SRPK1-201ENST00000346162 TRBV25-1A0A075B6N4 114 aa12.42□□□□□ -0.42
SRPK1-201ENST00000346162 VMO1Q7Z5L0 202 aa12.42□□□□□ -0.42
SRPK1-201ENST00000346162 TMEM14BQ9NUH8 114 aa12.42□□□□□ -0.42
SRPK1-201ENST00000346162 MRPL35Q9NZE8 188 aaKnown RBP12.42□□□□□ -0.42
SRPK1-201ENST00000346162 MYMXA0A1B0GTQ4 84 aa12.42□□□□□ -0.42
SRPK1-201ENST00000346162 DUX4L9Q6RFH8 374 aaPredicted RBP12.42□□□□□ -0.42
SRPK1-201ENST00000346162 IGHV3OR16-12A0A075B7B8 117 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 C5orf64Q2M2E5 130 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 LYPD1Q8N2G4 141 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 ZNF106Q9H2Y7 1883 aaKnown RBP12.41□□□□□ -0.42
SRPK1-201ENST00000346162 K7EMI3 77 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 PRR30Q53SZ7 412 aaPredicted RBP12.41□□□□□ -0.42
SRPK1-201ENST00000346162 OBSL1O75147 1896 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 PTPRQQ9UMZ3 2332 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 EFNA4P52798 201 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 Q6ZSR3 168 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 PCDH15Q96QU1 1955 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 HAX1O00165 279 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 SPANXDQ9BXN6 97 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 LINC00527Q9UJ94 153 aa12.41□□□□□ -0.42
SRPK1-201ENST00000346162 C15orf65H3BRN8 121 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 NDUFS7O75251 213 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 SLC25A16P16260 332 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 TCF15Q12870 199 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 C2orf70A6NJV1 201 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 C3orf36Q3SXR2 165 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 FGF23Q9GZV9 251 aaPredicted RBP12.4□□□□□ -0.42
SRPK1-201ENST00000346162 FAM215AQ9Y5M1 114 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 CACNA1AO00555 2505 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 A0A1W2PPI3 338 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 OOSP1A8MZH6 123 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 C17orf58Q2M2W7 97 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 Q8TCH9 128 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 DUX5Q96PT3 197 aa12.4□□□□□ -0.42
SRPK1-201ENST00000346162 ANKHD1Q8IWZ3 2542 aaKnown RBP12.4□□□□□ -0.43
SRPK1-201ENST00000346162 SH2D1AO60880 128 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 TRACP01848 142 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 FGF6P10767 208 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 C15orf32Q32M92 178 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 TEN1Q86WV5 123 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 C1orf43Q9BWL3 253 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 GLMPQ8WWB7 406 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 IGLV3-9A0A075B6K5 115 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 NPC2P61916 151 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 MINOS1Q5TGZ0 78 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 MINOS1-NBL1R4GNA1 71 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 IGKV2-40A0A087WW87 121 aaPredicted RBP12.39□□□□□ -0.43
SRPK1-201ENST00000346162 CEACAM4O75871 244 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 IGKV2D-40P01614 121 aaPredicted RBP12.39□□□□□ -0.43
SRPK1-201ENST00000346162 PRO1854Q9UHT4 67 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
SRPK1-201ENST00000346162 A0A0U1RRA0 63 aa12.38□□□□□ -0.43
SRPK1-201ENST00000346162 PAX1P15863 534 aa12.38□□□□□ -0.43
SRPK1-201ENST00000346162 ZNF134P52741 427 aa12.38□□□□□ -0.43
SRPK1-201ENST00000346162 MORN3Q6PF18 240 aaPredicted RBP12.38□□□□□ -0.43
SRPK1-201ENST00000346162 M0R1W7 72 aa12.38□□□□□ -0.43
SRPK1-201ENST00000346162 NPYP01303 97 aa12.38□□□□□ -0.43
SRPK1-201ENST00000346162 PIP4P1Q86T03 277 aa12.38□□□□□ -0.43
SRPK1-201ENST00000346162 TMEM126AQ9H061 195 aa12.38□□□□□ -0.43
SRPK1-201ENST00000346162 MRPL51Q4U2R6 128 aaKnown RBP12.38□□□□□ -0.43
SRPK1-201ENST00000346162 TTTY13Q9BZ97 58 aa12.38□□□□□ -0.43
SRPK1-201ENST00000346162 MRPL23Q16540 153 aaKnown RBP12.37□□□□□ -0.43
SRPK1-201ENST00000346162 K7ENP7 123 aa12.37□□□□□ -0.43
SRPK1-201ENST00000346162 DEFB104AQ8WTQ1 72 aa12.37□□□□□ -0.43
SRPK1-201ENST00000346162 PLEKHB2Q96CS7 222 aa12.37□□□□□ -0.43
SRPK1-201ENST00000346162 HLA-DRB4P13762 266 aa12.37□□□□□ -0.43
SRPK1-201ENST00000346162 HLA-DRB4X5D2U9 266 aa12.37□□□□□ -0.43
SRPK1-201ENST00000346162 TP53TG3Q9ULZ0 132 aa12.37□□□□□ -0.43
SRPK1-201ENST00000346162 MT-ATP8P03928 68 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 WT1P19544 449 aaPredicted RBP12.36□□□□□ -0.43
SRPK1-201ENST00000346162 Q8TAT8 98 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 PRADC1Q9BSG0 188 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 NDUFA4L2Q9NRX3 87 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 TRAV21A0A0B4J279 112 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 PAX8Q06710 450 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 KRTAP27-1Q3LI81 207 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 TMEM219Q86XT9 240 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 TNFRSF18Q9Y5U5 241 aa12.36□□□□□ -0.43
SRPK1-201ENST00000346162 Q6ZUT4 128 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms