RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 LAMTOR2Q9Y2Q5 125 aa7.14□□□□□ -1.27
ATG4A-202ENST00000345734 ZNF320A2RRD8 509 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 ZNF705FA8MVS1 300 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 IGF1P05019 195 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 ZNF705DP0CH99 300 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 ZNF705BP0CI00 300 aaPredicted RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 MGST1P10620 155 aaKnown RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 SRP14P37108 136 aaKnown RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 CNN1P51911 297 aaKnown RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 BPIFA4PQ86YQ2 179 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 STPG4Q8N801 248 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 RNASE7Q9H1E1 156 aaKnown RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 SONP18583 2426 aaKnown RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 TRBV19A0A075B6N1 114 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 TRGV3P03979 118 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 SLURP1P55000 103 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 RPL15P61313 204 aaKnown RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 ATP5G2Q06055 141 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 TOMM20LQ6UXN7 152 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 OR4F17Q8NGA8 305 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 EEF1AKMT3Q96AZ1 226 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 OTORQ9NRC9 128 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 MRPS16Q9Y3D3 137 aaKnown RBP7.13□□□□□ -1.27
ATG4A-202ENST00000345734 UNC79Q9P2D8 2635 aa7.13□□□□□ -1.27
ATG4A-202ENST00000345734 SCGB2A1O75556 95 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 FSHBP01225 129 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 C5orf17Q8NAS9 161 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 SPXQ9BT56 116 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 RABAC1Q9UI14 185 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 TRBV7-1A0A0A6YYK4 115 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 TCRAP04437 139 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 PPIFP30405 207 aaKnown RBP7.12□□□□□ -1.27
ATG4A-202ENST00000345734 IER3P46695 156 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 TPPP2P59282 170 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 PAFAH1B2P68402 229 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 KCNIP4Q6PIL6 250 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 SIGLEC15Q6ZMC9 328 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 LCNL1Q6ZST4 164 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 NIT1Q86X76 327 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 BAGE2Q86Y30 109 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 CIARTQ8N365 385 aaPredicted RBP7.12□□□□□ -1.27
ATG4A-202ENST00000345734 WFDC11Q8NEX6 87 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 BTF3L4Q96K17 158 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 V9GYV3 84 aa7.12□□□□□ -1.27
ATG4A-202ENST00000345734 ACANP16112 2415 aa7.11□□□□□ -1.27
ATG4A-202ENST00000345734 FOXL1Q12952 345 aa7.11□□□□□ -1.27
ATG4A-202ENST00000345734 KLK15Q9H2R5 256 aa7.11□□□□□ -1.27
ATG4A-202ENST00000345734 KLF12Q9Y4X4 402 aa7.11□□□□□ -1.27
ATG4A-202ENST00000345734 CUBNO60494 3623 aa7.11□□□□□ -1.27
ATG4A-202ENST00000345734 TRAV8-1A0A0A6YYK1 113 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 CLPSL1A2RUU4 121 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 FAM223BA6NKX1 122 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 BMPR1BO00238 502 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 TRBV12-3P01733 135 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 HNRNPA3P51991 378 aaKnown RBP7.1□□□□□ -1.27
ATG4A-202ENST00000345734 UBE2G1P62253 170 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 Q71RC1 249 aaPredicted RBP7.1□□□□□ -1.27
ATG4A-202ENST00000345734 FAM223AQ8IWN6 122 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 IL36BQ9NZH7 164 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 SMAD5-AS1Q9Y6J3 95 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 IGHV3-66A0A0C4DH42 116 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 ZNF207O43670 478 aaKnown RBP7.1□□□□□ -1.27
ATG4A-202ENST00000345734 IGHV3-11P01762 117 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 VAMP3Q15836 100 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 TCTEX1D4Q5JR98 221 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 ACTL10Q5JWF8 245 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 IBA57Q5T440 356 aaKnown RBP7.1□□□□□ -1.27
ATG4A-202ENST00000345734 GOLT1AQ6ZVE7 132 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 OR8I2Q8N0Y5 310 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 KLHDC1Q8N7A1 406 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 CMTM2Q8TAZ6 248 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 OSTCQ9NRP0 149 aa7.1□□□□□ -1.27
ATG4A-202ENST00000345734 MYO9AB2RTY4 2548 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 IGHV3OR16-13A0A075B7E8 117 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 IGHV3-49A0A0A0MS15 119 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 IGHV3-74A0A0B4J1X5 117 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 G3V4G9 280 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 M0R3E3 92 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 CA1P00915 261 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-202ENST00000345734 IGLV2-11P01706 119 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 APOHP02749 345 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-202ENST00000345734 CRYBA4P53673 196 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 CFHR3Q02985 330 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 FMC1Q96HJ9 113 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 ASCL2Q99929 193 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 SERTAD4Q9NUC0 356 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 HECTD1Q9ULT8 2610 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 NF1P21359 2839 aa7.09□□□□□ -1.27
ATG4A-202ENST00000345734 LTAP01374 205 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 TYMSP04818 313 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 FRMD6-AS1P0C7T7 363 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 RPL7P18124 248 aaKnown RBP7.09□□□□□ -1.28
ATG4A-202ENST00000345734 TCL1AP56279 114 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 RPEL1Q2QD12 228 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 IGFL4Q6B9Z1 124 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 Q6YL49 198 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 C9orf139Q6ZV77 190 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 GPR82Q96P67 336 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 MLST8Q9BVC4 326 aa7.09□□□□□ -1.28
ATG4A-202ENST00000345734 FASNP49327 2511 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms