RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 GOLT1BQ9Y3E0 138 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 LOC105371267A0A1B0GV96 52 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 CDKN1BP46527 198 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 TMEM78Q5T7P6 136 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 TMPRSS5Q9H3S3 457 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 STAB2Q8WWQ8 2551 aa15.11■□□□□ 0.01
SMARCB1-202ENST00000344921 INSP01308 110 aa15.11■□□□□ 0.01
SMARCB1-202ENST00000344921 CT45A10P0DMU9 189 aa15.11■□□□□ 0.01
SMARCB1-202ENST00000344921 TSPOP30536 169 aa15.11■□□□□ 0.01
SMARCB1-202ENST00000344921 COMMD7Q86VX2 200 aa15.11■□□□□ 0.01
SMARCB1-202ENST00000344921 LINC00477Q96M19 166 aa15.11■□□□□ 0.01
SMARCB1-202ENST00000344921 ZNF705EA8MWA4 302 aaPredicted RBP15.1■□□□□ 0.01
SMARCB1-202ENST00000344921 J3KRW8 73 aa15.1■□□□□ 0.01
SMARCB1-202ENST00000344921 SLC25A5P05141 298 aaKnown RBP15.1■□□□□ 0.01
SMARCB1-202ENST00000344921 DPPA3Q6W0C5 159 aa15.1■□□□□ 0.01
SMARCB1-202ENST00000344921 SFT2D1Q8WV19 159 aa15.1■□□□□ 0.01
SMARCB1-202ENST00000344921 VGLL1Q99990 258 aa15.1■□□□□ 0.01
SMARCB1-202ENST00000344921 AGPAT4-IT1Q9H0P7 198 aa15.1■□□□□ 0.01
SMARCB1-202ENST00000344921 DIRC3C9JPN6 131 aa15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 DEFB4AO15263 64 aa15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 CRXO43186 299 aaPredicted RBP15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 C9orf47Q6ZRZ4 202 aa15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 X6R8D5 127 aa15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 MIFP14174 115 aa15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 LEPP41159 167 aa15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 UBE2G2P60604 165 aa15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 SUMO1P63165 101 aaKnown RBP15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 ZNF705AQ6ZN79 300 aaPredicted RBP15.09■□□□□ 0.01
SMARCB1-202ENST00000344921 A0A1B0GV50 99 aa15.08■□□□□ 0
SMARCB1-202ENST00000344921 C1orf158Q8N1D5 194 aa15.08■□□□□ 0
SMARCB1-202ENST00000344921 ODF3Q96PU9 254 aa15.08■□□□□ 0
SMARCB1-202ENST00000344921 H2AFB1P0C5Y9 115 aa15.07■□□□□ 0
SMARCB1-202ENST00000344921 RAB5CP51148 216 aa15.07■□□□□ 0
SMARCB1-202ENST00000344921 SMUG1Q53HV7 270 aa15.07■□□□□ 0
SMARCB1-202ENST00000344921 IGHV4-28A0A0C4DH34 117 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 A0A1W2PRE2 83 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 RBAKDNA6NC62 111 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 GNG5P63218 68 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 KIR3DS1Q14943 382 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 GOLT1AQ6ZVE7 132 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 Q8NAQ8 132 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 C5orf17Q8NAS9 161 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 ZNF138P52744 262 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 ARL6IP6Q8N6S5 226 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 MBD3L1Q8WWY6 194 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 LINC01587Q99440 93 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 ZNF492Q9P255 531 aa15.06■□□□□ 0
SMARCB1-202ENST00000344921 SMIM9A6NGZ8 99 aa15.05■□□□□ -0
SMARCB1-202ENST00000344921 HBE1P02100 147 aa15.05■□□□□ -0
SMARCB1-202ENST00000344921 Q8TAT8 98 aa15.05■□□□□ -0
SMARCB1-202ENST00000344921 MUC7Q8TAX7 377 aa15.05■□□□□ -0
SMARCB1-202ENST00000344921 NEU1Q99519 415 aa15.05■□□□□ -0
SMARCB1-202ENST00000344921 C11orf68Q9H3H3 251 aaKnown RBP15.05■□□□□ -0
SMARCB1-202ENST00000344921 YTHDF2Q9Y5A9 579 aaKnown RBP15.05■□□□□ -0
SMARCB1-202ENST00000344921 GGTLC3B5MD39 225 aa15.04■□□□□ -0
SMARCB1-202ENST00000344921 GPX1P07203 203 aa15.04■□□□□ -0
SMARCB1-202ENST00000344921 SULT1A2P50226 295 aa15.04■□□□□ -0
SMARCB1-202ENST00000344921 GFI1BQ5VTD9 330 aa15.04■□□□□ -0
SMARCB1-202ENST00000344921 K7EQM0 130 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 RBMY1A1P0DJD3 496 aaKnown RBP15.03■□□□□ -0
SMARCB1-202ENST00000344921 RBMY1CP0DJD4 496 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 HTN1P15515 57 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 RBMY1FQ15415 496 aaKnown RBP15.03■□□□□ -0
SMARCB1-202ENST00000344921 RRN3P1Q2M238 152 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 TMEM256Q8N2U0 113 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 NKX6-2Q9C056 277 aaPredicted RBP15.03■□□□□ -0
SMARCB1-202ENST00000344921 TRAV12-3A0A0B4J271 114 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 FAM74A7A6NL05 159 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 KRBOX1C9JBD0 128 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 CST9LP1Q5W188 147 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 IL17DQ8TAD2 202 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 EPDR1Q9UM22 224 aa15.03■□□□□ -0
SMARCB1-202ENST00000344921 TEX46H3BTG2 121 aa15.02□□□□□ -0.01
SMARCB1-202ENST00000344921 TCRAP04437 139 aa15.02□□□□□ -0.01
SMARCB1-202ENST00000344921 RNASE4P34096 147 aaKnown RBP15.02□□□□□ -0.01
SMARCB1-202ENST00000344921 EMP1P54849 157 aa15.02□□□□□ -0.01
SMARCB1-202ENST00000344921 FAM19A4Q96LR4 140 aa15.02□□□□□ -0.01
SMARCB1-202ENST00000344921 C20orf144Q9BQM9 153 aa15.02□□□□□ -0.01
SMARCB1-202ENST00000344921 NIPSNAP3BQ9BS92 247 aa15.02□□□□□ -0.01
SMARCB1-202ENST00000344921 TRAV8-1A0A0A6YYK1 113 aa15.01□□□□□ -0.01
SMARCB1-202ENST00000344921 SERTM2A0A1B0GWG4 89 aa15.01□□□□□ -0.01
SMARCB1-202ENST00000344921 ZNF705GA8MUZ8 300 aaPredicted RBP15.01□□□□□ -0.01
SMARCB1-202ENST00000344921 SGK494Q96LW2 274 aa15.01□□□□□ -0.01
SMARCB1-202ENST00000344921 LOC102723971A0A1B0GUV8 181 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 C7orf71A4D174 169 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 CRISP2P16562 243 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 ALKAL2Q6UX46 152 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 EIF4E3Q8N5X7 224 aaKnown RBP15□□□□□ -0.01
SMARCB1-202ENST00000344921 KLLNB2CW77 178 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 H7BYZ3 331 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 PRM2P04554 102 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 NMBP08949 121 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 BTN1A1Q13410 526 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 CYB561D1Q8N8Q1 229 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 C11orf45Q8TAV5 145 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 ATG101Q9BSB4 218 aa15□□□□□ -0.01
SMARCB1-202ENST00000344921 TRBV7-9A0A0J9YWB2 115 aa14.99□□□□□ -0.01
SMARCB1-202ENST00000344921 TMEM189A5PLL7 270 aa14.99□□□□□ -0.01
SMARCB1-202ENST00000344921 PAGE4O60829 102 aa14.99□□□□□ -0.01
SMARCB1-202ENST00000344921 TAS2R60P59551 318 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms