RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 EXOC3-AS1Q8N2X6 119 aa8.71□□□□□ -1.02
SGCA-202ENST00000344627 CHAC2Q8WUX2 184 aa8.71□□□□□ -1.02
SGCA-202ENST00000344627 MRPL53Q96EL3 112 aaKnown RBP8.71□□□□□ -1.02
SGCA-202ENST00000344627 TMEM14CQ9P0S9 112 aa8.71□□□□□ -1.02
SGCA-202ENST00000344627 CDK2AP2O75956 126 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 RNASE4P34096 147 aaKnown RBP8.7□□□□□ -1.02
SGCA-202ENST00000344627 ICAM4Q14773 271 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 FAM122CQ6P4D5 195 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 MIR17HGQ75NE6 70 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 RNF141Q8WVD5 230 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 ASB13Q8WXK3 278 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 ZNF503Q96F45 646 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 ODF3Q96PU9 254 aa8.7□□□□□ -1.02
SGCA-202ENST00000344627 IGKV2-40A0A087WW87 121 aaPredicted RBP8.69□□□□□ -1.02
SGCA-202ENST00000344627 A0A0J9YY99 117 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 NBDYA0A0U1RRE5 68 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 C7orf71A4D174 169 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 C17orf112F2Z3M2 114 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 NDUFB4O95168 129 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 IGKV2D-40P01614 121 aaPredicted RBP8.69□□□□□ -1.02
SGCA-202ENST00000344627 SLC25A5P05141 298 aaKnown RBP8.69□□□□□ -1.02
SGCA-202ENST00000344627 NBEAP1P0C6P0 100 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 PDE6HQ13956 83 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 TTC32Q5I0X7 151 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 C6orf223Q8N319 242 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 GNPNAT1Q96EK6 184 aaPredicted RBP8.69□□□□□ -1.02
SGCA-202ENST00000344627 PYGO2Q9BRQ0 406 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 PAXXQ9BUH6 204 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 SLC25A2Q9BXI2 301 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 MED28Q9H204 178 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 OR51M1Q9H341 326 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 KCNIP2Q9NS61 270 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 ALG5Q9Y673 324 aa8.69□□□□□ -1.02
SGCA-202ENST00000344627 TRAV26-1A0A087WT03 109 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 H0YIZ8 118 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 GPX1P07203 203 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 OR10J4P0C629 311 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 M6PRP20645 277 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 BTN1A1Q13410 526 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 TMEM78Q5T7P6 136 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 Q6ZNX1 250 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 ZNRF2Q8NHG8 242 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 SCGB1C1Q8TD33 95 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 PPP1R1CQ8WVI7 109 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 WDR61Q9GZS3 305 aaKnown RBP8.68□□□□□ -1.02
SGCA-202ENST00000344627 AGPAT4-IT1Q9H0P7 198 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 GSN-AS1Q9NRJ2 163 aa8.68□□□□□ -1.02
SGCA-202ENST00000344627 TRGV2A0A075B6R0 118 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 H3BNG1 76 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 OR7C2O60412 319 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 IFNA5P01569 189 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 PET100P0DJ07 73 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 H2BFSP57053 126 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 CD300CQ08708 224 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 Q6ZTI0 123 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 SSX7Q7RTT5 188 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 FAM167A-AS1Q96KT0 104 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 VGLL1Q99990 258 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 MRPL32Q9BYC8 188 aaKnown RBP8.67□□□□□ -1.02
SGCA-202ENST00000344627 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 SMIM3Q9BZL3 60 aa8.67□□□□□ -1.02
SGCA-202ENST00000344627 TRGV1A0A0A0MS02 117 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 A0A1W2PPQ1 181 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 C16orf90A8MZG2 172 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 RGS13O14921 159 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 CSN1S1P47710 185 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 FFAR4Q5NUL3 377 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 C9orf47Q6ZRZ4 202 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 EIF4E3Q8N5X7 224 aaKnown RBP8.66□□□□□ -1.02
SGCA-202ENST00000344627 ZNF680Q8NEM1 530 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 ATP5SQ99766 215 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 FUT9Q9Y231 359 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 LINC00588Q9Y4M8 146 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 RYR1P21817 5038 aa8.66□□□□□ -1.02
SGCA-202ENST00000344627 MUC4Q99102 2169 aa8.65□□□□□ -1.02
SGCA-202ENST00000344627 ZNF324O75467 553 aaPredicted RBP8.65□□□□□ -1.02
SGCA-202ENST00000344627 MPC2O95563 127 aa8.65□□□□□ -1.02
SGCA-202ENST00000344627 HOXA5P20719 270 aa8.65□□□□□ -1.02
SGCA-202ENST00000344627 RANP62826 216 aaKnown RBP8.65□□□□□ -1.02
SGCA-202ENST00000344627 DAZ2Q13117 558 aaKnown RBP8.65□□□□□ -1.02
SGCA-202ENST00000344627 RXFP4Q8TDU9 374 aa8.65□□□□□ -1.02
SGCA-202ENST00000344627 ARPC5LQ9BPX5 153 aa8.65□□□□□ -1.02
SGCA-202ENST00000344627 TMPRSS5Q9H3S3 457 aa8.65□□□□□ -1.02
SGCA-202ENST00000344627 HSPB11Q9Y547 144 aa8.65□□□□□ -1.02
SGCA-202ENST00000344627 KLLNB2CW77 178 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 RPL12P30050 165 aaKnown RBP8.64□□□□□ -1.03
SGCA-202ENST00000344627 TAS2R45P59539 299 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 UBE2L3P68036 154 aaKnown RBP8.64□□□□□ -1.03
SGCA-202ENST00000344627 ZNF575Q86XF7 245 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 LINC00612Q8N6U2 182 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 FXYD5Q96DB9 178 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 PHYHIPLQ96FC7 376 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 HYLS1Q96M11 299 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 KLF12Q9Y4X4 402 aa8.64□□□□□ -1.03
SGCA-202ENST00000344627 EIF3GO75821 320 aaKnown RBP eCLIP8.63□□□□□ -1.03
SGCA-202ENST00000344627 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
SGCA-202ENST00000344627 CRISP2P16562 243 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms