RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 NPYP01303 97 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 GAGE5Q13069 117 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 GAGE6Q13070 117 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 ZNF295-AS1Q8N0V1 137 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 DUSP14O95147 198 aaKnown RBP3.82□□□□□ -1.8
CSMD3-203ENST00000343508 CDH23Q9H251 3354 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 IGHV3-64A0A075B6Q5 118 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 IGHV3OR16-8A0A075B7F1 116 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 SAP30O75446 220 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 LGALS1P09382 135 aaKnown RBP3.82□□□□□ -1.8
CSMD3-203ENST00000343508 FGF6P10767 208 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 CRIP3Q6Q6R5 217 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 ZNF491Q8N8L2 437 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
CSMD3-203ENST00000343508 IGHV3-49A0A0A0MS15 119 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 GTSF1Q8WW33 167 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 FAM167A-AS1Q96KT0 104 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 DUX5Q96PT3 197 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 SLC25A20O43772 301 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 P0C879 139 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 RBX1P62877 108 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 ASPHD1Q5U4P2 390 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 VMO1Q7Z5L0 202 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 C11orf53Q8IXP5 236 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 DUX3Q96PT4 197 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 IGLV3-9A0A075B6K5 115 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 ERCC8Q13216 396 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 Q6ZPA2 131 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 TP53TG1Q9Y2A0 90 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 TRGV11A0A075B6L2 103 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 FOXC1Q12948 553 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 PCP2Q8IVA1 136 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 SPAARA0A1B0GVQ0 90 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 K7ERJ3 54 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 FAM120AOSQ5T036 256 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 ZNF493Q6ZR52 646 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 IL17RELQ6ZVW7 336 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 TRPT1Q86TN4 253 aaKnown RBP3.81□□□□□ -1.8
CSMD3-203ENST00000343508 C22orf46C9J442 243 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 ACYP1P07311 99 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 EGR2P11161 476 aaPredicted RBP3.81□□□□□ -1.8
CSMD3-203ENST00000343508 LCNL1Q6ZST4 164 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 DYSFO75923 2080 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 IGKV3-20P01619 116 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 KLRD1Q13241 179 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 URB1O60287 2271 aaKnown RBP3.81□□□□□ -1.8
CSMD3-203ENST00000343508 OR13C6PQ8NH95 151 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 EDA2RQ9HAV5 297 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 ZNRD1Q9P1U0 126 aa3.81□□□□□ -1.8
CSMD3-203ENST00000343508 TRAV12-3A0A0B4J271 114 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 LYPD2Q6UXB3 125 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 C14orf178Q8N769 122 aaPredicted RBP3.8□□□□□ -1.8
CSMD3-203ENST00000343508 KAAG1Q9UBP8 84 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 LY6G6EA0A0G2JKS1 128 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 U3KQA8 63 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 LENEPQ9Y5L5 61 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 IGKV1OR2-108A0A075B7D4 117 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 IGHV1-69DA0A0B4J2H0 117 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 S100A7L2Q5SY68 101 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 TEN1Q86WV5 123 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 ABHD17AQ96GS6 310 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 SPXQ9BT56 116 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 TIMM21Q9BVV7 248 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 TRAV12-1A0A0B4J245 112 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.8□□□□□ -1.8
CSMD3-203ENST00000343508 INAFM2P0DMQ5 153 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 GLMPQ8WWB7 406 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 USMG5Q96IX5 58 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 SMIM2Q9BVW6 85 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 I3L3M4 83 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 FOXI1Q12951 378 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 PEMTQ9UBM1 199 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 GP9P14770 177 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 TP53TG3Q9ULZ0 132 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 TRBV6-1A0A0K0K1D8 114 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 A0A1B0GXF2 115 aa3.8□□□□□ -1.8
CSMD3-203ENST00000343508 TRAV8-3A0A0A6YYJ7 113 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 C9orf153Q5TBE3 101 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 TMEM105Q8N8V8 129 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 TRAV41A0A0B4J266 112 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 LEPROTO15243 131 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 RNASE1P07998 156 aaKnown RBP3.79□□□□□ -1.8
CSMD3-203ENST00000343508 DNAJC30Q96LL9 226 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 PRSS22Q9GZN4 317 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 CRYBA4P53673 196 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 EIF4EBP1Q13541 118 aaPredicted RBP3.79□□□□□ -1.8
CSMD3-203ENST00000343508 LY6EQ16553 131 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 ZNF672Q499Z4 452 aaPredicted RBP3.79□□□□□ -1.8
CSMD3-203ENST00000343508 TCTEX1D4Q5JR98 221 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 MED12LQ86YW9 2145 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 C19orf71A6NCJ1 209 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 AMTNQ6UX39 209 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 PRADC1Q9BSG0 188 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 XIRP2A4UGR9 3374 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 A0A0G2JNJ9 132 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 ZNF876PQ49A33 203 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 SH2D6Q7Z4S9 175 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 TPSG1Q9NRR2 321 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 Q9UFV3 132 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 IGKV3D-20A0A0C4DH25 116 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms