RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NDPQ00604 133 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 PPP1R32Q7Z5V6 425 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 RNF126Q9BV68 326 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 BUB3O43684 328 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 TRAV12-2A0A075B6T6 113 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 PRSS46E5RG02 174 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 IGKV4-1P06312 121 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 CD24P25063 80 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 MRPL36Q9P0J6 103 aaKnown RBP14.39□□□□□ -0.11
SMAD4-201ENST00000342988 NRXN2Q9P2S2 1712 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 Q8N8P6 123 aa14.39□□□□□ -0.11
SMAD4-201ENST00000342988 TMEM219Q86XT9 240 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 B5MCH6 92 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 SIVA1O15304 175 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 ZFP2Q6ZN57 461 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 DEFB125Q8N687 156 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 V9GYY9 64 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 A0A0B4J2C4 111 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 IGLL5B9A064 214 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 C5orf64Q2M2E5 130 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 SLC22A18ASQ8N1D0 253 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 ZNF329Q86UD4 541 aa14.38□□□□□ -0.11
SMAD4-201ENST00000342988 PRSS47A8MTI9 375 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 COX8AP10176 69 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 TIRAPP58753 221 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 U3KQE9 123 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 C5orf67F2Z3F1 127 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 RNF222A6NCQ9 220 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 CXCL1P09341 107 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 LYL1P12980 280 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 C1QL2Q7Z5L3 287 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 IL15RAQ13261 267 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 LINC01356Q8N9X3 169 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 F8VRH5 84 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 SMKR1H3BMG3 65 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 SH2D6Q7Z4S9 175 aa14.37□□□□□ -0.11
SMAD4-201ENST00000342988 JMJD7-PLA2G4BH0Y9G9 81 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 C17orf77Q96MU5 243 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 IGHV1-3A0A0C4DH29 117 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 ETV2O00321 342 aaPredicted RBP14.36□□□□□ -0.11
SMAD4-201ENST00000342988 NXPH4O95158 308 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 PFN1P07737 140 aaKnown RBP14.36□□□□□ -0.11
SMAD4-201ENST00000342988 Q8TAT8 98 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 C9orf47Q6ZRZ4 202 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 HS3ST6Q96QI5 342 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 PIN1P1O15428 100 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 SLC25A29Q8N8R3 303 aa14.36□□□□□ -0.11
SMAD4-201ENST00000342988 C2orf66Q6UXQ4 117 aa14.35□□□□□ -0.11
SMAD4-201ENST00000342988 DEFB104AQ8WTQ1 72 aa14.35□□□□□ -0.11
SMAD4-201ENST00000342988 IGKV1-8A0A0C4DH67 115 aa14.35□□□□□ -0.11
SMAD4-201ENST00000342988 H0YGX0 51 aa14.35□□□□□ -0.11
SMAD4-201ENST00000342988 PRB2P02812 416 aaPredicted RBP14.35□□□□□ -0.11
SMAD4-201ENST00000342988 CDKN1AP38936 164 aa14.35□□□□□ -0.11
SMAD4-201ENST00000342988 HGFACQ04756 655 aa14.35□□□□□ -0.11
SMAD4-201ENST00000342988 ANKRD39Q53RE8 183 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 ATRAIDQ6UW56 229 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 WDR83OSQ9Y284 106 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 IGLC2P0DOY2 106 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 IGLC3P0DOY3 106 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 SAP25Q8TEE9 199 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 ALPK3Q96L96 1907 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 H3BMG7 143 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 IGHV1-8P0DP01 117 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 Q0VG73 95 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 GLRX5Q86SX6 157 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 A0A1B0GTI1 187 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 PRB1P04280 392 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 ARMS2P0C7Q2 107 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 CDKN1BP46527 198 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 LINC01590Q5TEZ4 76 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 CHCHD2Q9Y6H1 151 aaPredicted RBP14.34□□□□□ -0.11
SMAD4-201ENST00000342988 DKK1O94907 266 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 RHPN1-AS1Q9BWJ2 59 aa14.34□□□□□ -0.11
SMAD4-201ENST00000342988 FAM201AQ5SY85 155 aa14.33□□□□□ -0.11
SMAD4-201ENST00000342988 WFDC11Q8NEX6 87 aa14.33□□□□□ -0.11
SMAD4-201ENST00000342988 IGKV2D-24A0A075B6R9 120 aa14.33□□□□□ -0.12
SMAD4-201ENST00000342988 IGHV4-28A0A0C4DH34 117 aa14.33□□□□□ -0.12
SMAD4-201ENST00000342988 CELA3BP08861 270 aa14.33□□□□□ -0.12
SMAD4-201ENST00000342988 Q6ZVH6 145 aa14.33□□□□□ -0.12
SMAD4-201ENST00000342988 TIMM17AQ99595 171 aa14.33□□□□□ -0.12
SMAD4-201ENST00000342988 LOC101059948A0A1B0GTJ6 334 aa14.33□□□□□ -0.12
SMAD4-201ENST00000342988 H3BUX3 64 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 IGKV1-5P01602 117 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 UBE2AP49459 152 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 BUB1B-PAK6H3BSN5 160 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 NTN3O00634 580 aaPredicted RBP14.32□□□□□ -0.12
SMAD4-201ENST00000342988 PDE6GP18545 87 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 R3HDMLQ9H3Y0 253 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 ZNF134P52741 427 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 OPRPNQ99935 248 aaPredicted RBP14.32□□□□□ -0.12
SMAD4-201ENST00000342988 EFNA4P52798 201 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 E9PLN8 166 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 J3QQQ9 107 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 LGALS9BQ3B8N2 356 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 LGALS9CQ6DKI2 356 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 C20orf144Q9BQM9 153 aa14.32□□□□□ -0.12
SMAD4-201ENST00000342988 RSPO4Q2I0M5 234 aaPredicted RBP14.31□□□□□ -0.12
SMAD4-201ENST00000342988 NMSQ5H8A3 153 aa14.31□□□□□ -0.12
SMAD4-201ENST00000342988 NPYP01303 97 aa14.31□□□□□ -0.12
SMAD4-201ENST00000342988 SRSF3P84103 164 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms