RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 C8orf49Q96NF6 230 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 SPTBN4Q9H254 2564 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 ZC2HC1AQ96GY0 325 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 MEGF9Q9H1U4 602 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 B4DSR2 109 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 NDUFS7O75251 213 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 DUSP14O95147 198 aaKnown RBP5.71□□□□□ -1.5
VCAN-202ENST00000342785 TNFRSF6BO95407 300 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 SUMO2P61956 95 aaKnown RBP5.71□□□□□ -1.5
VCAN-202ENST00000342785 TEX29Q8N6K0 151 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 FAM167A-AS1Q96KT0 104 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 DEFB104AQ8WTQ1 72 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 ZNF479Q96JC4 524 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 VCX2Q9H322 139 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 ZNF815PA8K554 130 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 CIRBPQ14011 172 aaKnown RBP5.7□□□□□ -1.5
VCAN-202ENST00000342785 UTF1Q5T230 341 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 PRSS57Q6UWY2 283 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 MRPL36Q9P0J6 103 aaKnown RBP5.7□□□□□ -1.5
VCAN-202ENST00000342785 CHTOPQ9Y3Y2 248 aaKnown RBP5.7□□□□□ -1.5
VCAN-202ENST00000342785 FRMD6-AS1P0C7T7 363 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 PRSS46E5RG02 174 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 FCN3O75636 299 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 CR1LQ2VPA4 569 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 MEIG1Q5JSS6 88 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 PRSS33Q8NF86 280 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 LINC01587Q99440 93 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 DPH3P1Q9H4G8 78 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 CD5LO43866 347 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 E7EUB6 86 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 USMG5Q96IX5 58 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 UTRNP46939 3433 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 IGHV1-24A0A0C4DH33 117 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 IGKV3OR2-268A0A0C4DH90 116 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 LTAP01374 205 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 TDRG1Q3Y452 100 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 UNQ6494/PRO21346Q6UXR6 183 aa5.7□□□□□ -1.5
VCAN-202ENST00000342785 EML6Q6ZMW3 1958 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 ZNF418Q8TF45 676 aaPredicted RBP5.69□□□□□ -1.5
VCAN-202ENST00000342785 PRO3102Q9H379 93 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 KIR2DL5BA0A0G2JN68 375 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 KIR2DL5BA0A0G2JPC4 375 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 RUSC1-AS1Q66K80 236 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 IGF2-ASQ6U949 168 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 KIR2DL5AQ8N109 375 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 RITA1Q96K30 269 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 COX11Q9Y6N1 276 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 CRXO43186 299 aaPredicted RBP5.69□□□□□ -1.5
VCAN-202ENST00000342785 MRPL51Q4U2R6 128 aaKnown RBP5.69□□□□□ -1.5
VCAN-202ENST00000342785 WIPF2Q8TF74 440 aaPredicted RBP5.69□□□□□ -1.5
VCAN-202ENST00000342785 IGFBPL1Q8WX77 278 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 SMAD7O15105 426 aaKnown RBP5.69□□□□□ -1.5
VCAN-202ENST00000342785 SAMD5Q5TGI4 173 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 LRRK2Q5S007 2527 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 GP9P14770 177 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 OR5A1Q8NGJ0 315 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 MRAP2Q96G30 205 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 DAZ1Q9NQZ3 744 aaKnown RBP5.69□□□□□ -1.5
VCAN-202ENST00000342785 ZFYVE26Q68DK2 2539 aa5.69□□□□□ -1.5
VCAN-202ENST00000342785 TRAV12-3A0A0B4J271 114 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 IGLV1-47P01700 117 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 NPSP0C0P6 89 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 MAJINQ3KP22 176 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 VGLL1Q99990 258 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 PCNTO95613 3336 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 TMEM8BA6NDV4 472 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 K7EIM0 57 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 NPYP01303 97 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 DAZAP2Q15038 168 aaPredicted RBP5.68□□□□□ -1.5
VCAN-202ENST00000342785 SIGLEC8Q9NYZ4 499 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 UBE2L6O14933 153 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 NBL1P41271 181 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 KIR3DS1Q14943 382 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 FAM120AOSQ5T036 256 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 JMJD1CQ15652 2540 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 IGHV2-70DA0A0C4DH43 119 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 LINC01549A6NIU2 74 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 IL17RELQ6ZVW7 336 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 C11orf44Q8N8P7 122 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 FAM223BA6NKX1 122 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 ZNF876PQ49A33 203 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 FAM223AQ8IWN6 122 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 HLA-DMBP28068 263 aa5.68□□□□□ -1.5
VCAN-202ENST00000342785 I3L2K1 104 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 C22orf34Q6ZV56 151 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 PEMTQ9UBM1 199 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 SORL1Q92673 2214 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 INS-IGF2F8WCM5 200 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 C1orf122Q6ZSJ8 110 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 C8orf86Q6ZUL3 223 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 CSTL1Q9H114 145 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 ABCA12Q86UK0 2595 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 A0A1W2PRX2 142 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 VCYO14598 125 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 PIP4P2Q8N4L2 257 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 TRGV11A0A075B6L2 103 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 IGHV1-69DA0A0B4J2H0 117 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 HOXA3O43365 443 aaPredicted RBP5.67□□□□□ -1.5
VCAN-202ENST00000342785 IGHV1-69P01742 117 aa5.67□□□□□ -1.5
VCAN-202ENST00000342785 OR11H6Q8NGC7 330 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms