RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 IGHV7-4-1A0A0J9YVY3 117 aa11.97□□□□□ -0.49
UBE3B-202ENST00000342494 THAP8Q8NA92 274 aa11.97□□□□□ -0.49
UBE3B-202ENST00000342494 YLPM1P49750 1951 aaKnown RBP11.96□□□□□ -0.49
UBE3B-202ENST00000342494 TMEM213A2RRL7 107 aa11.96□□□□□ -0.49
UBE3B-202ENST00000342494 HIST1H4AP62805 103 aaKnown RBP11.96□□□□□ -0.49
UBE3B-202ENST00000342494 FNDC1Q4ZHG4 1894 aaPredicted RBP11.96□□□□□ -0.49
UBE3B-202ENST00000342494 A0A096LPF7 62 aa11.96□□□□□ -0.49
UBE3B-202ENST00000342494 PMVKQ15126 192 aa11.96□□□□□ -0.49
UBE3B-202ENST00000342494 DNAJC30Q96LL9 226 aa11.96□□□□□ -0.49
UBE3B-202ENST00000342494 IGF2BP2-AS1Q96M15 143 aa11.96□□□□□ -0.49
UBE3B-202ENST00000342494 PCNX1Q96RV3 2341 aa11.96□□□□□ -0.49
UBE3B-202ENST00000342494 VWA8A3KMH1 1905 aa11.96□□□□□ -0.49
UBE3B-202ENST00000342494 KAAG1Q9UBP8 84 aa11.96□□□□□ -0.49
UBE3B-202ENST00000342494 ANXA2RQ3ZCQ2 193 aa11.96□□□□□ -0.5
UBE3B-202ENST00000342494 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 hDV102S1A0JD36 115 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 VWC2LB2RUY7 222 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 SHISA9B4DS77 424 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 K7EM74 188 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 PFN2P35080 140 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 MMP23AO75900 390 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 C22orf46C9J442 243 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 TICRRQ7Z2Z1 1910 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 ESDP10768 282 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 SNHG12Q9BXW3 62 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 ZNF492Q9P255 531 aa11.95□□□□□ -0.5
UBE3B-202ENST00000342494 CCL24O00175 119 aa11.94□□□□□ -0.5
UBE3B-202ENST00000342494 WT1P19544 449 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-202ENST00000342494 DIAPH2-AS1Q14236 149 aa11.94□□□□□ -0.5
UBE3B-202ENST00000342494 CHAC1Q9BUX1 264 aa11.94□□□□□ -0.5
UBE3B-202ENST00000342494 WT1-ASQ06250 92 aa11.94□□□□□ -0.5
UBE3B-202ENST00000342494 C2orf82Q6UX34 121 aa11.94□□□□□ -0.5
UBE3B-202ENST00000342494 HIST3H2BBQ8N257 126 aa11.94□□□□□ -0.5
UBE3B-202ENST00000342494 H3BUA1 57 aa11.94□□□□□ -0.5
UBE3B-202ENST00000342494 SYS1-DBNDD2H3BUS1 97 aa11.94□□□□□ -0.5
UBE3B-202ENST00000342494 HOXB4P17483 251 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-202ENST00000342494 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 SDHAF1A6NFY7 115 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 PRSS46E5RG02 174 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 H3BRN7 92 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 TMEM256Q8N2U0 113 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 ZNF114Q8NC26 417 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 FAM208BQ5VWN6 2430 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 NAA38Q9BRA0 125 aaKnown RBP11.93□□□□□ -0.5
UBE3B-202ENST00000342494 C15orf65H3BRN8 121 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
UBE3B-202ENST00000342494 SLAQ13239 276 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 LHBP01229 141 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 C3orf79P0CE67 100 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 ANK1P16157 1881 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 TMEM141Q96I45 108 aa11.93□□□□□ -0.5
UBE3B-202ENST00000342494 PRR25Q96S07 402 aa11.92□□□□□ -0.5
UBE3B-202ENST00000342494 IGHV4-61A0A0C4DH41 118 aa11.92□□□□□ -0.5
UBE3B-202ENST00000342494 IGHV2-70P01814 119 aa11.92□□□□□ -0.5
UBE3B-202ENST00000342494 HOXD3P31249 432 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-202ENST00000342494 KLF5Q13887 457 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-202ENST00000342494 KLF2Q9Y5W3 355 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-202ENST00000342494 ATRXP46100 2492 aa11.92□□□□□ -0.5
UBE3B-202ENST00000342494 ZFHX2Q9C0A1 2572 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-202ENST00000342494 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
UBE3B-202ENST00000342494 COLCA2A8K830 154 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 UBE2CO00762 179 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 LYL1P12980 280 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 ZNF134P52741 427 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 NXPH4O95158 308 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 TP53BP1Q12888 1972 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-202ENST00000342494 IGHV4-30-2A0A087WSY4 118 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 HLA-DRB4P13762 266 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 C9orf66Q5T8R8 295 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 HLA-DRB4X5D2U9 266 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 FAM231BA6NCW3 169 aa11.91□□□□□ -0.5
UBE3B-202ENST00000342494 FAM104BQ5XKR9 115 aa11.9□□□□□ -0.5
UBE3B-202ENST00000342494 NEGR1Q7Z3B1 354 aa11.9□□□□□ -0.5
UBE3B-202ENST00000342494 DEFB136Q30KP8 78 aa11.9□□□□□ -0.5
UBE3B-202ENST00000342494 ZNF48Q96MX3 618 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-202ENST00000342494 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.5
UBE3B-202ENST00000342494 A0A087X0K7 114 aa11.9□□□□□ -0.5
UBE3B-202ENST00000342494 A0A0J9YY99 117 aa11.9□□□□□ -0.5
UBE3B-202ENST00000342494 MUC6Q6W4X9 2439 aa11.9□□□□□ -0.51
UBE3B-202ENST00000342494 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 PCP4P48539 62 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 FOXI2Q6ZQN5 318 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 IGKV1-39P01597 117 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 IGKV1D-39P04432 117 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 GAGE2EQ4V326 116 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 Q8N8P6 123 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 GAGE2DQ9UEU5 116 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 IGKV2D-24A0A075B6R9 120 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 CT83Q5H943 113 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 CTSZQ9UBR2 303 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 A0A1B0GUS0 222 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 IGLC1P0CG04 106 aa11.89□□□□□ -0.51
UBE3B-202ENST00000342494 IGKV1OR2-108A0A075B7D4 117 aa11.88□□□□□ -0.51
UBE3B-202ENST00000342494 CFPP27918 469 aa11.88□□□□□ -0.51
UBE3B-202ENST00000342494 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
UBE3B-202ENST00000342494 TRAV26-2A0A0B4J265 109 aa11.88□□□□□ -0.51
UBE3B-202ENST00000342494 RHOHQ15669 191 aa11.88□□□□□ -0.51
UBE3B-202ENST00000342494 IGF2-ASQ6U949 168 aa11.88□□□□□ -0.51
UBE3B-202ENST00000342494 GBF1Q92538 1859 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms