RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 FCGR2BP31994 310 aaPredicted RBP10.26□□□□□ -0.77
COL18A1-201ENST00000342220 DEFB112Q30KQ8 113 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 SHISA2Q6UWI4 295 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 C19orf24Q9BVV8 132 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 FAM181BA6NEQ2 426 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 TEX22C9J3V5 150 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 BMPR1BO00238 502 aa10.26□□□□□ -0.77
COL18A1-201ENST00000342220 F11RQ9Y624 299 aaKnown RBP10.26□□□□□ -0.77
COL18A1-201ENST00000342220 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 MT-ND6P03923 174 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 AMY1AP04745 511 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 MINOS1Q5TGZ0 78 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 RNASEKQ6P5S7 137 aaKnown RBP10.25□□□□□ -0.77
COL18A1-201ENST00000342220 TSSC4Q9Y5U2 329 aaPredicted RBP10.25□□□□□ -0.77
COL18A1-201ENST00000342220 MINOS1-NBL1R4GNA1 71 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 HSD52Q0P140 79 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 C15orf32Q32M92 178 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 SPATA12Q7Z6I5 190 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 LINC01356Q8N9X3 169 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 F8P00451 2351 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 H0Y8G0 127 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 IGFL4Q6B9Z1 124 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 PATE2Q6UY27 113 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 C8orf31Q8N9H6 132 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 Q8N9W7 124 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 RAB37Q96AX2 223 aa10.25□□□□□ -0.77
COL18A1-201ENST00000342220 MRPL32Q9BYC8 188 aaKnown RBP10.25□□□□□ -0.77
COL18A1-201ENST00000342220 IGHV7-81A0A0B4J1V7 117 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 TEX48A0A1B0GUV7 120 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 ATP5IP56385 69 aaPredicted RBP10.24□□□□□ -0.77
COL18A1-201ENST00000342220 PRR31Q5SQ13 230 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 UFSP1Q6NVU6 142 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 CACNG8Q8WXS5 425 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 JMJD8Q96S16 334 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 MRGPRG-AS1Q2M3A8 158 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 NEGR1Q7Z3B1 354 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 PAXXQ9BUH6 204 aa10.24□□□□□ -0.77
COL18A1-201ENST00000342220 GEMIN7Q9H840 131 aaKnown RBP10.24□□□□□ -0.77
COL18A1-201ENST00000342220 CLEC3BP05452 202 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 ZNF562Q6V9R5 426 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 OR2K2Q8NGT1 345 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 HLA-DQA1P01909 254 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 GNG5P63218 68 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 PAX8Q06710 450 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 ST20Q9HBF5 79 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 IZUMO1RA6ND01 250 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 APCSP02743 223 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 TRGV3P03979 118 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 SMR3AQ99954 134 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 NPFFR1Q9GZQ6 430 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 YAE1D1Q9NRH1 226 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 C21orf62Q9NYP8 219 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 SS18L2Q9UHA2 77 aa10.23□□□□□ -0.77
COL18A1-201ENST00000342220 SETXQ7Z333 2677 aaKnown RBP10.22□□□□□ -0.77
COL18A1-201ENST00000342220 IGKV1D-37A0A075B6S9 117 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 C1orf122Q6ZSJ8 110 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 MCRIP2Q9BUT9 160 aaKnown RBP10.22□□□□□ -0.77
COL18A1-201ENST00000342220 ZNF331Q9NQX6 463 aaPredicted RBP10.22□□□□□ -0.77
COL18A1-201ENST00000342220 ATRQ13535 2644 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 K7EP34 96 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 SLC25A16P16260 332 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 SRSF2Q01130 221 aaKnown RBP10.22□□□□□ -0.77
COL18A1-201ENST00000342220 PSG3Q16557 428 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 TCRBV4S1A1TA0A5B7 111 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 GAGE12HA6NDE8 117 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 HAX1O00165 279 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 PEX7O00628 323 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 COX19Q49B96 90 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 C10orf99Q6UWK7 81 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 OR10AG1Q8NH19 301 aa10.22□□□□□ -0.77
COL18A1-201ENST00000342220 PET117Q6UWS5 81 aa10.21□□□□□ -0.77
COL18A1-201ENST00000342220 FXYD5Q96DB9 178 aa10.21□□□□□ -0.77
COL18A1-201ENST00000342220 TIMM8BQ9Y5J9 83 aaPredicted RBP10.21□□□□□ -0.77
COL18A1-201ENST00000342220 GDF5OSQ5U4N7 250 aa10.21□□□□□ -0.78
COL18A1-201ENST00000342220 TMEM70Q9BUB7 260 aa10.21□□□□□ -0.78
COL18A1-201ENST00000342220 SPCS1Q9Y6A9 102 aa10.21□□□□□ -0.78
COL18A1-201ENST00000342220 KMT2BQ9UMN6 2715 aaPredicted RBP10.21□□□□□ -0.78
COL18A1-201ENST00000342220 SLC25A5P05141 298 aaKnown RBP10.2□□□□□ -0.78
COL18A1-201ENST00000342220 NUP35Q8NFH5 326 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 OR1L4Q8NGR5 311 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 NIPBLQ6KC79 2804 aaeCLIP10.2□□□□□ -0.781e-6■■□□□ 13.8
COL18A1-201ENST00000342220 FSTL3O95633 263 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 CRYGBP07316 175 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 MFAP4P55083 255 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 HIST1H1AQ02539 215 aaPredicted RBP10.2□□□□□ -0.78
COL18A1-201ENST00000342220 C18orf32Q8TCD1 76 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 MBD6Q96DN6 1003 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 FOXE3Q13461 319 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 ZNF479Q96JC4 524 aa10.2□□□□□ -0.78
COL18A1-201ENST00000342220 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
COL18A1-201ENST00000342220 PGPA6NDG6 321 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 K7EIM0 57 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 HIST1H1EP10412 219 aaKnown RBP10.19□□□□□ -0.78
COL18A1-201ENST00000342220 PMCHL2Q9BQD1 86 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 KLK15Q9H2R5 256 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 MOB4Q9Y3A3 225 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 C2CD3Q4AC94 2353 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 A0A0G2JLM5 398 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 C9orf118A6NHY6 69 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms