RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 GUSBP11Q6P575 273 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 HAX1O00165 279 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 RPL15P61313 204 aaKnown RBP2.9□□□□□ -1.95
SYNE1-201ENST00000341594 SPSB3Q6PJ21 355 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 LY6HO94772 140 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 LYPD3O95274 346 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 OPRPNQ99935 248 aaPredicted RBP2.9□□□□□ -1.95
SYNE1-201ENST00000341594 PATE3B3GLJ2 98 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 CTRLP40313 264 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 CST6Q15828 149 aa2.9□□□□□ -1.95
SYNE1-201ENST00000341594 SARAFQ96BY9 339 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 TAAR3PQ9P1P4 343 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 CD7P09564 240 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 SYS1-DBNDD2H3BUS1 97 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF146Q15072 292 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 A0A1B0GUT8 65 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RBMY1BA6NDE4 496 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RBMY1EA6NEQ0 496 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RBMY1DP0C7P1 496 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RBMY1A1P0DJD3 496 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RBMY1CP0DJD4 496 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 HBBP68871 147 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RBMY1FQ15415 496 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 TEPPQ6URK8 271 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 CR1LQ2VPA4 569 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF672Q499Z4 452 aaPredicted RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 C8orf86Q6ZUL3 223 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 A0A0J9YXY3 114 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 EFEMP2O95967 443 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 NXPH1P58417 271 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 SLC25A15Q9Y619 301 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 A0A0A6YYD4 124 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 A0A1W2PPM0 123 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 FOXL2NBQ6ZUU3 175 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 CSDC2Q9Y534 153 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 CFHR4Q92496 578 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 ESM1Q9NQ30 184 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 SCO2A0A1W2PP80 73 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 GABRG2P18507 467 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 MPV17L2Q567V2 206 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF441Q8N8Z8 693 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 DLL1O00548 723 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 NDUFV3P56181 108 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 IL17RELQ6ZVW7 336 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 LINC01546A6NGU7 62 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 C22orf34Q6ZV56 151 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 MMD2Q8IY49 270 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RPL30P62888 115 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 OR11H6Q8NGC7 330 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 FMC1Q96HJ9 113 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM133Q9H2Q1 129 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 CFHR1Q03591 330 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RPP25LQ8N5L8 163 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 A0A1B0GX78 115 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM219Q86XT9 240 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 RPL23P62829 140 aaKnown RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 Q6ZRM9 215 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 LGALS9BQ3B8N2 356 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 LGALS9CQ6DKI2 356 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 FDCSPQ8NFU4 85 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 SAA1P0DJI8 122 aaPredicted RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 B4GALT1P15291 398 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 ETDBQ3ZM63 59 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM196Q5HYL7 178 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 LINC01555Q8NAE3 123 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 A0A0J9YWU9 116 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 ZNF721Q8TF20 911 aa2.89□□□□□ -1.95
SYNE1-201ENST00000341594 FLG2Q5D862 2391 aaPredicted RBP2.89□□□□□ -1.95
SYNE1-201ENST00000341594 ATRQ13535 2644 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 IGHV5-51A0A0C4DH38 117 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 C2CD4DB7Z1M9 353 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 IGLV3-19P01714 112 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 IBA57Q5T440 356 aaKnown RBP2.88□□□□□ -1.95
SYNE1-201ENST00000341594 MRPS17Q9Y2R5 130 aaKnown RBP2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TIRAPP58753 221 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 CELA3BP08861 270 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 ZNRF1Q8ND25 227 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 C16orf52Q8NHV5 167 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 OVOL1O14753 267 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM170BQ5T4T1 132 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 Q6ZR03 302 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 PILRAQ9UKJ1 303 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 NBEAL1Q6ZS30 2694 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 VWC2LB2RUY7 222 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 PGLYRP1O75594 196 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-201ENST00000341594 SERF1AO75920 110 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 GATD1Q8NB37 220 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 LIFP15018 202 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 SLC25A16P16260 332 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 MPV17P39210 176 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 EFNB3Q15768 340 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 MDP1Q86V88 176 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 PDE6GP18545 87 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 UBE2WQ96B02 151 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 LOXL1Q08397 574 aaPredicted RBP2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TMEM30CPA0ZSE6 113 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 TRPT1Q86TN4 253 aaKnown RBP2.88□□□□□ -1.95
SYNE1-201ENST00000341594 SLC37A2Q8TED4 501 aa2.88□□□□□ -1.95
SYNE1-201ENST00000341594 C16orf92Q96LL3 132 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms