RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NPVFQ9HCQ7 196 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 PSENENQ9NZ42 101 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 CTDSPLO15194 276 aa10.79□□□□□ -0.68
NECTIN1-202ENST00000340882 RGS5O15539 181 aa10.79□□□□□ -0.68
NECTIN1-202ENST00000340882 HNRNPA3P51991 378 aaKnown RBP10.79□□□□□ -0.68
NECTIN1-202ENST00000340882 LINC01556Q5JQF7 62 aa10.79□□□□□ -0.68
NECTIN1-202ENST00000340882 BLNKQ8WV28 456 aa10.79□□□□□ -0.68
NECTIN1-202ENST00000340882 PCNPQ8WW12 178 aaKnown RBP10.79□□□□□ -0.68
NECTIN1-202ENST00000340882 VCX3AQ9NNX9 186 aa10.79□□□□□ -0.68
NECTIN1-202ENST00000340882 TNXBP22105 4242 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 RGS13O14921 159 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 AGPAT2O15120 278 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 METTL15P1P0C7V9 234 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 VAMP1P23763 118 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 ID3Q02535 119 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 TMEM128Q5BJH2 165 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 ZFAND2AQ8N6M9 145 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 OR10P1Q8NGE3 313 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 CCDC59Q9P031 241 aaKnown RBP10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 RNF24Q9Y225 148 aa10.78□□□□□ -0.68
NECTIN1-202ENST00000340882 GOSR2O14653 212 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 COX7A2P2O60397 106 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 IGHV3-30P01768 117 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 IGHV3-33P01772 117 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 ORM1P02763 201 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 GPX1P07203 203 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 IGHV3-30-3P0DP02 117 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 IGHV3-30-5P0DP03 117 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 CRISP2P16562 243 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 ARL16Q0P5N6 197 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 IL18Q14116 193 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 PXDC1Q5TGL8 231 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 OR10G4Q8NGN3 311 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 TXNDC17Q9BRA2 123 aa10.77□□□□□ -0.69
NECTIN1-202ENST00000340882 SSSCA1O60232 199 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 MT1HL1P0DM35 61 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 PPP1R1AQ13522 171 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 C10orf113Q5VZT2 155 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 TMEM14EPQ6UXP3 125 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 CIRBP-AS1Q8TBR5 109 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 LINC00477Q96M19 166 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 MGST2Q99735 147 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 CHAC1Q9BUX1 264 aa10.76□□□□□ -0.69
NECTIN1-202ENST00000340882 NDUFB4O95168 129 aa10.75□□□□□ -0.69
NECTIN1-202ENST00000340882 SFT2D2O95562 160 aa10.75□□□□□ -0.69
NECTIN1-202ENST00000340882 ZNF546Q86UE3 836 aa10.75□□□□□ -0.69
NECTIN1-202ENST00000340882 Q8N3U1 123 aa10.75□□□□□ -0.69
NECTIN1-202ENST00000340882 RAB2BQ8WUD1 216 aa10.75□□□□□ -0.69
NECTIN1-202ENST00000340882 ARPC5LQ9BPX5 153 aa10.75□□□□□ -0.69
NECTIN1-202ENST00000340882 IGKV2-40A0A087WW87 121 aaPredicted RBP10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 PIGBOS1A0A0B4J2F0 54 aa10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 C9JCJ5 164 aa10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 FNDC10F2Z333 226 aa10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 IGKV2D-40P01614 121 aaPredicted RBP10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 GUK1Q16774 197 aa10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 MRPL53Q96EL3 112 aaKnown RBP10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 DAZAP1Q96EP5 407 aaKnown RBP10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 DIRAS2Q96HU8 199 aa10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 SMIM8Q96KF7 97 aa10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 SLC25A31Q9H0C2 315 aa10.74□□□□□ -0.69
NECTIN1-202ENST00000340882 TRBV19A0A075B6N1 114 aa10.73□□□□□ -0.69
NECTIN1-202ENST00000340882 TIRAPP58753 221 aa10.73□□□□□ -0.69
NECTIN1-202ENST00000340882 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
NECTIN1-202ENST00000340882 C9orf47Q6ZRZ4 202 aa10.73□□□□□ -0.69
NECTIN1-202ENST00000340882 EXOC3-AS1Q8N2X6 119 aa10.73□□□□□ -0.69
NECTIN1-202ENST00000340882 RASL10AQ92737 203 aa10.73□□□□□ -0.69
NECTIN1-202ENST00000340882 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
NECTIN1-202ENST00000340882 MGAT4CQ9UBM8 478 aa10.73□□□□□ -0.69
NECTIN1-202ENST00000340882 ZNF253O75346 499 aa10.72□□□□□ -0.69
NECTIN1-202ENST00000340882 PPT1P50897 306 aa10.72□□□□□ -0.69
NECTIN1-202ENST00000340882 ZNF846Q147U1 533 aa10.72□□□□□ -0.69
NECTIN1-202ENST00000340882 NHLRC2Q8NBF2 726 aa10.72□□□□□ -0.69
NECTIN1-202ENST00000340882 DNAJC4Q9NNZ3 241 aa10.72□□□□□ -0.69
NECTIN1-202ENST00000340882 IGHV3-16A0A0C4DH30 117 aa10.71□□□□□ -0.69
NECTIN1-202ENST00000340882 IGLV2-8P01709 118 aa10.71□□□□□ -0.69
NECTIN1-202ENST00000340882 NMBP08949 121 aa10.71□□□□□ -0.69
NECTIN1-202ENST00000340882 OR10J3Q5JRS4 329 aa10.71□□□□□ -0.69
NECTIN1-202ENST00000340882 MIC13Q5XKP0 118 aa10.71□□□□□ -0.69
NECTIN1-202ENST00000340882 BAALCQ8WXS3 180 aa10.71□□□□□ -0.69
NECTIN1-202ENST00000340882 Q8TAT8 98 aa10.7□□□□□ -0.7
NECTIN1-202ENST00000340882 TM2D2Q9BX73 214 aa10.7□□□□□ -0.7
NECTIN1-202ENST00000340882 SRRQ9GZT4 340 aa10.7□□□□□ -0.7
NECTIN1-202ENST00000340882 ZNF492Q9P255 531 aa10.7□□□□□ -0.7
NECTIN1-202ENST00000340882 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
NECTIN1-202ENST00000340882 TRAV4A0A0B4J268 109 aa10.69□□□□□ -0.7
NECTIN1-202ENST00000340882 PYYP10082 97 aa10.69□□□□□ -0.7
NECTIN1-202ENST00000340882 TNFSF8P32971 234 aa10.69□□□□□ -0.7
NECTIN1-202ENST00000340882 SPCS2Q15005 226 aa10.69□□□□□ -0.7
NECTIN1-202ENST00000340882 RS1O15537 224 aa10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 LAGE3Q14657 143 aa10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 TMEM183BQ1AE95 376 aa10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 TMEM78Q5T7P6 136 aa10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 SH2D6Q7Z4S9 175 aa10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 TMEM183AQ8IXX5 376 aa10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 OR4C5Q8NGB2 326 aa10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 PRELID1Q9Y255 219 aa10.68□□□□□ -0.7
NECTIN1-202ENST00000340882 RBFOX3A6NFN3 312 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms