RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 Q8N1Y9 231 aa13.35□□□□□ -0.27
CDK11B-201ENST00000340677 C9orf106Q8NAJ2 232 aa13.35□□□□□ -0.27
CDK11B-201ENST00000340677 URB1O60287 2271 aaKnown RBP13.35□□□□□ -0.27
CDK11B-201ENST00000340677 ARL14EPLP0DKL9 152 aa13.35□□□□□ -0.27
CDK11B-201ENST00000340677 UBE2D3P61077 147 aa13.35□□□□□ -0.27
CDK11B-201ENST00000340677 UBE2D2P62837 147 aa13.35□□□□□ -0.27
CDK11B-201ENST00000340677 IGKCP01834 107 aa13.34□□□□□ -0.27
CDK11B-201ENST00000340677 ZNF56Q15929 161 aa13.34□□□□□ -0.27
CDK11B-201ENST00000340677 SPANXN5Q5MJ07 72 aa13.34□□□□□ -0.27
CDK11B-201ENST00000340677 H7C1H1 209 aa13.34□□□□□ -0.27
CDK11B-201ENST00000340677 HOXA3O43365 443 aaPredicted RBP13.34□□□□□ -0.27
CDK11B-201ENST00000340677 NPCDR1Q9BY65 106 aa13.34□□□□□ -0.27
CDK11B-201ENST00000340677 LGALS1P09382 135 aaKnown RBP13.33□□□□□ -0.28
CDK11B-201ENST00000340677 PATE4P0C8F1 98 aa13.33□□□□□ -0.28
CDK11B-201ENST00000340677 PRIMA1Q86XR5 153 aa13.33□□□□□ -0.28
CDK11B-201ENST00000340677 AGPAT4-IT1Q9H0P7 198 aa13.33□□□□□ -0.28
CDK11B-201ENST00000340677 A0A1B0GXF2 115 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 Q8NA96 180 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 SHANK2-AS3Q9BTD1 123 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 USP24Q9UPU5 2620 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 A0A096LPE4 126 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 MYMXA0A1B0GTQ4 84 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 A0A1W2PPZ6 126 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 SPINT2O43291 252 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 IGHV1-2P23083 117 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 ASPHD1Q5U4P2 390 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 PIFOQ8TCI5 191 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 PLEKHA3Q9HB20 300 aa13.32□□□□□ -0.28
CDK11B-201ENST00000340677 GTSCR1Q86UQ5 136 aa13.31□□□□□ -0.28
CDK11B-201ENST00000340677 Q96M66 194 aa13.31□□□□□ -0.28
CDK11B-201ENST00000340677 SLC25A20O43772 301 aa13.31□□□□□ -0.28
CDK11B-201ENST00000340677 FCER1GP30273 86 aa13.31□□□□□ -0.28
CDK11B-201ENST00000340677 SEM1Q6ZVN7 128 aa13.31□□□□□ -0.28
CDK11B-201ENST00000340677 VKORC1Q9BQB6 163 aa13.31□□□□□ -0.28
CDK11B-201ENST00000340677 NTN5Q8WTR8 489 aaPredicted RBP13.3□□□□□ -0.28
CDK11B-201ENST00000340677 HIST1H4GQ99525 98 aa13.3□□□□□ -0.28
CDK11B-201ENST00000340677 ZNF256Q9Y2P7 627 aaPredicted RBP13.3□□□□□ -0.28
CDK11B-201ENST00000340677 FAM215AQ9Y5M1 114 aa13.3□□□□□ -0.28
CDK11B-201ENST00000340677 C19orf71A6NCJ1 209 aa13.3□□□□□ -0.28
CDK11B-201ENST00000340677 ZNF503-AS2A6NEH8 195 aa13.3□□□□□ -0.28
CDK11B-201ENST00000340677 IGLV2-8P01709 118 aa13.3□□□□□ -0.28
CDK11B-201ENST00000340677 PIGYQ3MUY2 71 aa13.3□□□□□ -0.28
CDK11B-201ENST00000340677 CNEP1R1Q8N9A8 125 aa13.3□□□□□ -0.28
CDK11B-201ENST00000340677 PTPRQQ9UMZ3 2332 aa13.29□□□□□ -0.28
CDK11B-201ENST00000340677 INTS1Q8N201 2190 aaKnown RBP13.29□□□□□ -0.28
CDK11B-201ENST00000340677 ATP5G1P05496 136 aa13.29□□□□□ -0.28
CDK11B-201ENST00000340677 HLA-DMBP28068 263 aa13.29□□□□□ -0.28
CDK11B-201ENST00000340677 Q6ZRM9 215 aa13.29□□□□□ -0.28
CDK11B-201ENST00000340677 ATP5L2Q7Z4Y8 100 aa13.29□□□□□ -0.28
CDK11B-201ENST00000340677 ZNF503Q96F45 646 aa13.29□□□□□ -0.28
CDK11B-201ENST00000340677 IMUPQ9GZP8 106 aa13.29□□□□□ -0.28
CDK11B-201ENST00000340677 ZNF355PQ9NSJ1 428 aa13.29□□□□□ -0.28
CDK11B-201ENST00000340677 LINC01549A6NIU2 74 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 NPYP01303 97 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 ZNF414Q96IQ9 312 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 SPANXDQ9BXN6 97 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 CALYQ9NYX4 217 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 SPTBN2O15020 2390 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 FOXF2Q12947 444 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 MDP1Q86V88 176 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 BRK1Q8WUW1 75 aa13.28□□□□□ -0.28
CDK11B-201ENST00000340677 TRBV7-3A0A075B6L6 115 aa13.27□□□□□ -0.29
CDK11B-201ENST00000340677 IGKV1-27A0A075B6S5 117 aa13.27□□□□□ -0.29
CDK11B-201ENST00000340677 TRGV9Q99603 122 aa13.27□□□□□ -0.29
CDK11B-201ENST00000340677 ZNF71Q9NQZ8 489 aaPredicted RBP13.27□□□□□ -0.29
CDK11B-201ENST00000340677 FAM90A7PA6NKC0 464 aa13.27□□□□□ -0.29
CDK11B-201ENST00000340677 FAM90A22PA8MWA6 464 aa13.27□□□□□ -0.29
CDK11B-201ENST00000340677 FAM90A12PA8MX19 464 aa13.27□□□□□ -0.29
CDK11B-201ENST00000340677 FAM90A23PA8MXZ1 464 aa13.27□□□□□ -0.29
CDK11B-201ENST00000340677 NXT2Q9NPJ8 142 aaKnown RBP13.27□□□□□ -0.29
CDK11B-201ENST00000340677 ZNHIT1O43257 154 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 ERVK-16P61578 105 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 Q6ZPA2 131 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 MYOZ3Q8TDC0 251 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 C16orf95Q9H693 158 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 FAM208BQ5VWN6 2430 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 CACNA1DQ01668 2161 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 A0A096LNJ9 63 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 HIGD1CA8MV81 97 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 HBBP68871 147 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 CD164Q04900 197 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 DPH3P1Q9H4G8 78 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 DKK2Q9UBU2 259 aa13.26□□□□□ -0.29
CDK11B-201ENST00000340677 LGALS9O00182 355 aa13.25□□□□□ -0.29
CDK11B-201ENST00000340677 IGKV3-15P01624 115 aa13.25□□□□□ -0.29
CDK11B-201ENST00000340677 PMAIP1Q13794 54 aa13.25□□□□□ -0.29
CDK11B-201ENST00000340677 TMEM200BQ69YZ2 307 aa13.25□□□□□ -0.29
CDK11B-201ENST00000340677 CACNG5Q9UF02 275 aa13.25□□□□□ -0.29
CDK11B-201ENST00000340677 SLC25A16P16260 332 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 WDR31Q8NA23 367 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 C16orf92Q96LL3 132 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 ANKRD11Q6UB99 2663 aaPredicted RBP13.24□□□□□ -0.29
CDK11B-201ENST00000340677 SVILO95425 2214 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 IGHV3OR15-7A0A075B7D8 119 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 LYZL6O75951 148 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 FAM90A15PP0C7V4 464 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 FAM90A14PP0C7W9 464 aa13.24□□□□□ -0.29
CDK11B-201ENST00000340677 BEX4Q9NWD9 120 aaPredicted RBP13.24□□□□□ -0.29
CDK11B-201ENST00000340677 IGKV1-12A0A0C4DH73 117 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms